ID A0A0V0WKQ7_9BILA Unreviewed; 893 AA.
AC A0A0V0WKQ7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 24.
DE SubName: Full=E3 ubiquitin-protein ligase synoviolin {ECO:0000313|EMBL:KRX75779.1};
GN Name=SYVN1 {ECO:0000313|EMBL:KRX75779.1};
GN ORFNames=T06_3763 {ECO:0000313|EMBL:KRX75779.1};
OS Trichinella sp. T6.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=92179 {ECO:0000313|EMBL:KRX75779.1, ECO:0000313|Proteomes:UP000054673};
RN [1] {ECO:0000313|EMBL:KRX75779.1, ECO:0000313|Proteomes:UP000054673}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS34 {ECO:0000313|EMBL:KRX75779.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX75779.1}.
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DR EMBL; JYDK01000115; KRX75779.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0WKQ7; -.
DR Proteomes; UP000054673; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR CDD; cd09876; PIN_Nob1-like; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR Gene3D; 6.20.210.10; Nin one binding (NOB1), Zn-ribbon-like; 1.
DR InterPro; IPR039907; NOB1.
DR InterPro; IPR036283; NOB1_Zf-like_sf.
DR InterPro; IPR014881; NOB1_Zn-bd.
DR InterPro; IPR033411; Ribonuclease_PIN.
DR PANTHER; PTHR12814; RNA-BINDING PROTEIN NOB1; 1.
DR PANTHER; PTHR12814:SF2; RNA-BINDING PROTEIN NOB1; 1.
DR Pfam; PF08772; NOB1_Zn_bind; 1.
DR Pfam; PF17146; PIN_6; 1.
DR SUPFAM; SSF144206; NOB1 zinc finger-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000054673};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..893
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5006871754"
FT TRANSMEM 102..121
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 141..160
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 181..207
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 525..610
FT /note="Ribonuclease PIN"
FT /evidence="ECO:0000259|Pfam:PF17146"
FT DOMAIN 750..812
FT /note="Nin one binding (NOB1) Zn-ribbon-like"
FT /evidence="ECO:0000259|Pfam:PF08772"
FT REGION 360..382
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 396..417
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 669..693
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..382
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 893 AA; 100613 MW; 0FD5E1E0565E9045 CRC64;
MQVRYGHLLV FSFLLTAAVV FHAFHQRKQF YPSMVYLSKS NASVTHIADR AMFAVTETCL
AFTIFRDDFS PRFVAQFTQL FFFKCFHWMA EERIDYMERS PVVTTLFCAR IMGLIAILSA
VDSYHISHAY FTTLQKGATP QIVFGFEYAI LLTVVFHIAV KYVLHRVDLR QPHPWENKAV
YLLYFELVIV FLRVLLYAIF ICVTMQLHTF PLFSIRPMYL ALKTLKKAIM DAILSQRAIR
NMNSLYPDVT AEDLSRGDLN MPTWFAGLPA GIIQPPAPGV GDGTPSSINP TVFASFTGNA
QAFPTPPDFT GLTDEEVREM EGNERKSVEA RIRCLRNIQT LLDGAVVLMQ QYTSLMSAMD
EKRSVNTEET EHKKETTSKT EEVNAKTVNI DEMAEKPSTS AAAVAGSSSG DAQHELRQRR
LQHYEKSAKA VHLCMNLYNN FCKYNQSSLC TGLNFFTISA IFSLINKSPR SFGGTKAGFI
CSFHQTYTEA IAANIRCHDN HCFCILDSDL SFILITEMQL LVEHLMVDTV GFVKADDLRK
YGKNIYTIHD ILNEIRDSNT RKKLSALPYD LKTVMPDEKA IRFVIEFSKK TGDYPSLSVT
DVKLIAAVYT MELEHVGSEH IVQEPKVQKT SAVGGLKCED VKGLPGFYMS SKKKQSDCSD
LEEAVRKIDI QDHSTSEEEN SLSESDSEYD DDEIRDTSNL SGWITPENFS STVGSANDTV
PVACLTADFA IQNVLLHMGL KVVSVDGMLI KQLKTYILRC FSCFHTTSKM MKKFCPNCGN
ATLKRLAISV DENGCTVFHF SRRKFSIPAP KGGKHANNLI LCEDQPVSQN RLSRKARQNL
DVFDPDYIAG QSPFSLNDIT SRSALLGIRA IHRRPRRNPN TYSLGRKRGG KKR
//
