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Database: UniProt
Entry: A0A0V0XJY5_TRIPS
LinkDB: A0A0V0XJY5_TRIPS
Original site: A0A0V0XJY5_TRIPS 
ID   A0A0V0XJY5_TRIPS        Unreviewed;      1748 AA.
AC   A0A0V0XJY5;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   31-JUL-2019, entry version 17.
DE   SubName: Full=Nidogen-1 {ECO:0000313|EMBL:KRX88299.1};
GN   Name=Nid1 {ECO:0000313|EMBL:KRX88299.1};
GN   ORFNames=T4E_5849 {ECO:0000313|EMBL:KRX88299.1};
OS   Trichinella pseudospiralis (Parasitic roundworm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX88299.1, ECO:0000313|Proteomes:UP000054815};
RN   [1] {ECO:0000313|EMBL:KRX88299.1, ECO:0000313|Proteomes:UP000054815}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS141 {ECO:0000313|EMBL:KRX88299.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00076}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KRX88299.1}.
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DR   EMBL; JYDU01000241; KRX88299.1; -; Genomic_DNA.
DR   Proteomes; UP000054815; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0007160; P:cell-matrix adhesion; IEA:InterPro.
DR   Gene3D; 2.120.10.30; -; 1.
DR   InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR   InterPro; IPR032485; DUF5050.
DR   InterPro; IPR001881; EGF-like_Ca-bd_dom.
DR   InterPro; IPR013032; EGF-like_CS.
DR   InterPro; IPR000742; EGF-like_dom.
DR   InterPro; IPR000152; EGF-type_Asp/Asn_hydroxyl_site.
DR   InterPro; IPR024731; EGF_dom.
DR   InterPro; IPR003645; Fol_N.
DR   InterPro; IPR006605; G2_nidogen/fibulin_G2F.
DR   InterPro; IPR009017; GFP.
DR   InterPro; IPR009030; Growth_fac_rcpt_cys_sf.
DR   InterPro; IPR000033; LDLR_classB_rpt.
DR   InterPro; IPR003886; NIDO_dom.
DR   Pfam; PF16472; DUF5050; 1.
DR   Pfam; PF12947; EGF_3; 1.
DR   Pfam; PF07645; EGF_CA; 1.
DR   Pfam; PF07474; G2F; 1.
DR   Pfam; PF06119; NIDO; 1.
DR   SMART; SM00181; EGF; 19.
DR   SMART; SM00179; EGF_CA; 7.
DR   SMART; SM00274; FOLN; 6.
DR   SMART; SM00682; G2F; 1.
DR   SMART; SM00135; LY; 5.
DR   SMART; SM00539; NIDO; 1.
DR   SUPFAM; SSF54511; SSF54511; 1.
DR   SUPFAM; SSF57184; SSF57184; 1.
DR   PROSITE; PS00010; ASX_HYDROXYL; 2.
DR   PROSITE; PS01186; EGF_2; 14.
DR   PROSITE; PS50026; EGF_3; 17.
DR   PROSITE; PS51120; LDLRB; 5.
DR   PROSITE; PS51220; NIDO; 1.
DR   PROSITE; PS50993; NIDOGEN_G2; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000054815};
KW   Disulfide bond {ECO:0000256|PROSITE-ProRule:PRU00076,
KW   ECO:0000256|SAAS:SAAS00601599};
KW   EGF-like domain {ECO:0000256|PROSITE-ProRule:PRU00076,
KW   ECO:0000256|SAAS:SAAS00602928};
KW   Membrane {ECO:0000256|SAAS:SAAS00998125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054815};
KW   Repeat {ECO:0000256|SAAS:SAAS00594563};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL        1     18       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        19   1748       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5006872553.
FT   DOMAIN       95    255       NIDO. {ECO:0000259|PROSITE:PS51220}.
FT   DOMAIN      357    398       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      402    626       Nidogen G2 beta-barrel.
FT                                {ECO:0000259|PROSITE:PS50993}.
FT   DOMAIN      680    720       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      721    761       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      780    820       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      829    863       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      868    905       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      916    955       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN      964   1003       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1009   1049       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1058   1099       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1101   1144       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1152   1193       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1202   1245       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1246   1290       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1293   1336       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1339   1378       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   DOMAIN     1402   1442       EGF-like. {ECO:0000259|PROSITE:PS50026}.
FT   REPEAT     1492   1520       LDL-receptor class B.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00461}.
FT   REPEAT     1530   1572       LDL-receptor class B.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00461}.
FT   REPEAT     1573   1617       LDL-receptor class B.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00461}.
FT   REPEAT     1618   1659       LDL-receptor class B.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00461}.
FT   REPEAT     1661   1684       LDL-receptor class B.
FT                                {ECO:0000256|PROSITE-ProRule:PRU00461}.
FT   REGION      259    302       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   DISULFID    730    747       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1018   1035       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1068   1085       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1162   1179       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1259   1276       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1304   1321       {ECO:0000256|PROSITE-ProRule:PRU00076}.
FT   DISULFID   1349   1366       {ECO:0000256|PROSITE-ProRule:PRU00076}.
SQ   SEQUENCE   1748 AA;  195754 MW;  2F904895F1063009 CRC64;
     MFFVCYCFCA ILFAQIGAVP KQNFYPFGRH HGDHSLAPND DQSSDELQLL DSIHFYGKVY
     RSVYINENGM ISFDTDFNSY RTGELTDFGH PLIAIFYADV DISGPHGGHV FYRQFYQILR
     TSQNPELLKT SSDLIRNKFH WDASDYEAKS LLIVTWDRVG SYQRHNDRIN SFQLVISSNE
     TTSYAQFLYA DDEIQWIKST DKYPHGSNQI ARAAFVDAEN NIYALPESYS KRMFDINKET
     NVALPGVFLY RISESTIVSP QDDDEEADDY YPYDPSEYED GEPLEYTENN EEQKLEEESD
     EIEQAGLMCP DNFHGDSCPE NCHLIQEKYC QRCHCPQDVE DHTSTPPTGS RGSYPKSVDH
     CLYAGPHACH ANAECVNYQD GFCCRCKVGF IGNGVDCLSE NEAQRISGRV SGRLNDVDIV
     DSELHTYAVL EDGRTYTAIS RIPEKIGTSM LFLNTLGSIM GWLFSKPTNQ SVENGFTMTG
     GRLNRTVTVH VADQHTVTIQ QDFSGQDNHG YLKTNVFIAG TVPHLPTSTT VDFGEHYEEF
     SRQRYFSGVV KSYSNLLVTA GNERYSVIVD QTIRFDQSCP FLHVQTGRRS LLKQERSYVV
     YETAEQMVRY AAGNSLEPPG YQRENPCQEG AHDCTGPHVV CVPENQRYRC ACEDGYQMQY
     GRENSLVCIG ENDFKFATSY LDECSHGMHR CDINANCINM EGGYSCQCLP GFYGDGYQCS
     EQLICGMKIC NTNADCLLDH ATRLPRCVCR PGFVGDGVSC TLIGKEMMTV DLRLPGQQPS
     SNPCDQVRCH DQAECIVDKN QVARCYCKSG YQGDGYSSCE IVSYETGSQD NDCEKLQCGT
     NAQCSLDQNG IARCFCIHGF EGDGYYCKPI TCERVQCSAD AECHYNTNGV AECVCKDGYE
     GDGFQCQRKL QTTATYPKEC LQFICGKNAE CRLNHQGNPG CYCKEGFERD GVHCKQVSLD
     SRTPTFSCEN IRCGQNAQCY RDYTGVANCY CNPGYEGDGY QCRPVEAEQR DQCDQIHCGP
     NAFCKIDLVT SQPTCHCESG YQRDGDICKL VEDRQEQPGN LCRSHQDCSE HGQCTYNDAI
     EAYQCQCRPP YSGDGIHCFL EAETCEHTRN CHPDADCVFE QHETGGGYRC RCRKGFSGNG
     YQCQPLESVA AAEIQCNVLN TCHPNAQCVF DSNSRRYVCQ CQQGFTGDGY NCQETSRSEE
     KAMHPCQSAD DCHVNAHCVN VPSSPDQYLC ECLPGFRGDG LNICEPADEC NPGAQPTGCA
     EQAACLYDNN EQAYKCRCLQ GYAGDGKICT LERTQDCSFD PSLCHRDAEC LFEHERSMHV
     CQCRPGFLGD GYYSCQLQSS ESCVVQNLCD PQARCVPNER GTDFHCVCNA GYEGDGFTCN
     RITGTAFYIT LNNDFNNFVV LVHKDCSRDT NICDENAVCV SENLRHVCRC KAGYHGSGFI
     CSSDSRVRGR ALVFSQGMSL VQRGLLPDDY GKQLIVVPFQ IAVGVDYDCQ EDKIYWTDVS
     GHSVHSSNLD GSNVTTLFDT EGIVIDSLNR NLYYTDSIRD EIVVSSLRGN HRVAIIKDGL
     VNPRALALDP IDRKLYYSDW HREKPVIGRL NLDGTARELF VTSNIALPNG LVVLNRRREL
     CWADAGTQRL ECIGLNGGGR HVIFAPLGYP FGLTAHNEET FYWTDWEDKR IHSVNIYGQD
     HHSMEAAVGA SGKLYGIVAI PTQCFPGESP CMFNNGGCRY VCTPDHRGAR RCLCPNDVSE
     VECNQVFR
//
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