GenomeNet

Database: UniProt
Entry: A0A0V0Y5U1_TRIPS
LinkDB: A0A0V0Y5U1_TRIPS
Original site: A0A0V0Y5U1_TRIPS 
ID   A0A0V0Y5U1_TRIPS        Unreviewed;       689 AA.
AC   A0A0V0Y5U1;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 17.
DE   SubName: Full=Protein SMG7 {ECO:0000313|EMBL:KRX95597.1};
DE   Flags: Fragment;
GN   Name=Smg7 {ECO:0000313|EMBL:KRX95597.1};
GN   ORFNames=T4E_9412 {ECO:0000313|EMBL:KRX95597.1};
OS   Trichinella pseudospiralis (Parasitic roundworm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX95597.1, ECO:0000313|Proteomes:UP000054815};
RN   [1] {ECO:0000313|EMBL:KRX95597.1, ECO:0000313|Proteomes:UP000054815}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS141 {ECO:0000313|EMBL:KRX95597.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRX95597.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JYDU01000054; KRX95597.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V0Y5U1; -.
DR   STRING; 6337.A0A0V0Y5U1; -.
DR   Proteomes; UP000054815; Unassembled WGS sequence.
DR   GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR018834; DNA/RNA-bd_Est1-type.
DR   InterPro; IPR045153; Est1/Ebs1-like.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR15696:SF0; PINC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR15696; SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7; 1.
DR   Pfam; PF10373; EST1_DNA_bind; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
PE   4: Predicted;
KW   Nonsense-mediated mRNA decay {ECO:0000256|ARBA:ARBA00023161};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054815}.
FT   DOMAIN          215..470
FT                   /note="DNA/RNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF10373"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:KRX95597.1"
SQ   SEQUENCE   689 AA;  79446 MW;  4D921221181A6E34 CRC64;
     LFLNSILTYC IYVVISDVNF KLLSVLLIYI KFENKTGIMF AKCSTSIANS AESEYAYLLN
     QMVNRNGSIN WKIRSELQAV LEQKILENPS VAVEECLELF YWNRCYKNCI DMYEKQKRKN
     ELSSEWFSKS DKHFQDLQLF MYNGVLFLED FMNRILNTSG LSIDWLDWHV ADAFDYVSEK
     SFSSDVPVDV WHYLIQFCLI HIGDFHRKML DYDLAERCYI QATKLCYKRG HAFNQLGILQ
     MTSGHNIHAL YFYTRAHCCE VSFTGAGVNL EHFYKLFIKQ CLNLPNATGE QLFCNLQALL
     YLGDQVSRAE TTMMSFLATL KRAISTGELN ARHLVYMLVI TFGSFWKIDK TCNVNVKSID
     HLQDQLSFLK KLIIQFLQSF LVILLSCEEA QFSVVADAVY ILVSWIQYQS PDFLLVNNFH
     KDQRHLSSLA KFLNSLQRNK QFHVDMLSNA VDEQPLPVDV SLLGFLPLDG TFSRFASTEE
     AETYTDLILL KRLVEYGKFV VRKVNDEQLF ISNIVQCNNQ QMLQFKSKYC SPLDQFKSSL
     EAEEQNFEEI SSIYISDTAG LINLENDLHG ISADLASLPT PCAPKKFPSF EQSTLKNRDR
     WNFSNNSKQQ AEEDSQAESC FDFDAFIRRL QNSSKQVMDF RTSAPTYAKQ DGGRISESNF
     DSILQSSDSM RTLNLLEEAA SVLPKTRKL
//
DBGET integrated database retrieval system