ID A0A0V0YDW5_TRIPS Unreviewed; 679 AA.
AC A0A0V0YDW5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 29.
DE SubName: Full=Lupus La-like protein A {ECO:0000313|EMBL:KRX98431.1};
GN Name=ssb-a {ECO:0000313|EMBL:KRX98431.1};
GN ORFNames=T4E_3015 {ECO:0000313|EMBL:KRX98431.1};
OS Trichinella pseudospiralis (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX98431.1, ECO:0000313|Proteomes:UP000054815};
RN [1] {ECO:0000313|EMBL:KRX98431.1, ECO:0000313|Proteomes:UP000054815}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS141 {ECO:0000313|EMBL:KRX98431.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX98431.1}.
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DR EMBL; JYDU01000022; KRX98431.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0YDW5; -.
DR STRING; 6337.A0A0V0YDW5; -.
DR Proteomes; UP000054815; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd07323; LAM; 1.
DR CDD; cd12291; RRM1_La; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR006630; La_HTH.
DR InterPro; IPR014886; La_xRRM.
DR InterPro; IPR002344; Lupus_La.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR35842; SI:CH211-67E16.11; 1.
DR PANTHER; PTHR35842:SF1; SI:CH211-67E16.11; 1.
DR Pfam; PF05383; La; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF08777; RRM_3; 1.
DR PRINTS; PR00302; LUPUSLA.
DR SMART; SM00715; LA; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50961; HTH_LA; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS51939; XRRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000054815};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00332}.
FT DOMAIN 260..354
FT /note="HTH La-type RNA-binding"
FT /evidence="ECO:0000259|PROSITE:PS50961"
FT DOMAIN 365..448
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 476..599
FT /note="XRRM"
FT /evidence="ECO:0000259|PROSITE:PS51939"
FT REGION 209..255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 449..473
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 576..679
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 233..255
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..615
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 633..650
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 679 AA; 76548 MW; A3E8456E75B467EF CRC64;
MLHDWSTIRG HIQSLCKSPN CVDVLLVMIH GPAALHTSPS LILGDFNHDG SGNPGEWYSM
HDLLDDLAYC QANQVHLILD HSFSGQVIEL LNKSTKHKNV IAVASSDAEQ FSMGSEFTKL
WLRKNQLPDC FTDSFHLVKS FVQNSTPQIF QGSEADQGKT LTGAPCQSNS AYNEQELLEN
YSGCQNVPTA LLNSFVQLAM TDIISNEMTS EVTEQETEKV NLSVSEDAAD TAPANNSEHD
EKSEENGLAG NQPKDEIKQE LPIEILKAKI RKQMEYYFCN ENLCTDKFLR AEMEKDSGIP
LETFMTFNRI KALTNDVAVV VAALKEVESD FLEVSKMTDD QLNIRRKLSF PLPDWDAFIA
SRAERTAVVK KFPLNVTLDK LEEFFQPLAK IESLRMIYKK DASRSFTGTV FVIFSDAEEM
KLFLTRENLL YEECKLTFHQ LTVKKKQDET EATTKVESME TTPVKNSRKR KENKVTRRKG
VVLHVDNIPS RVNRHQLHAL FSNYQPIEWI EFGRGDTKAK VRFQGDENVA QEVLTKIQSE
SDQFMLEENP LGLRLLTEAE EEDYWSSVMQ AIEGKKTRVD TDGTTKRRGR RKQQHLKTND
HEDHLQEEEN KGNEVVDTDA AAAAAAAVDD GQQNESMEET NTSMEVNVTA EKDSMDTEES
NVEVEGAEVA AAETNAMSA
//
