ID A0A0V0YG68_TRIPS Unreviewed; 939 AA.
AC A0A0V0YG68;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=SWI/SNF complex subunit SMARCC2 {ECO:0000313|EMBL:KRX99162.1};
DE Flags: Fragment;
GN Name=SMARCC2 {ECO:0000313|EMBL:KRX99162.1};
GN ORFNames=T4E_12307 {ECO:0000313|EMBL:KRX99162.1};
OS Trichinella pseudospiralis (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX99162.1, ECO:0000313|Proteomes:UP000054815};
RN [1] {ECO:0000313|EMBL:KRX99162.1, ECO:0000313|Proteomes:UP000054815}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS141 {ECO:0000313|EMBL:KRX99162.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX99162.1}.
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DR EMBL; JYDU01000016; KRX99162.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0YG68; -.
DR Proteomes; UP000054815; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032451; SMARCC_C.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR032448; SWIRM-assoc.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12802:SF41; BRAHMA ASSOCIATED PROTEIN 155 KDA; 1.
DR PANTHER; PTHR12802; SWI/SNF COMPLEX-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16495; SWIRM-assoc_1; 1.
DR Pfam; PF16498; SWIRM-assoc_3; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000054815}.
FT DOMAIN 1..59
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 143..189
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 146..197
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 308..341
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..795
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 836..939
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 308..332
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 504..577
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 578..628
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 670..688
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 689..722
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 745..778
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 837..862
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 869..916
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRX99162.1"
SQ SEQUENCE 939 AA; 104325 MW; BFE3589782D43687 CRC64;
LAYRNFMIDT YRLNPYEYLT ATACRRNLAG DVCAIFRVHA FLEQWGLINY QVDAENRPNP
VGPPSTSHFM ILCDTPAGVE YSGGLTRLHQ IQKERKSGIK GDDDLMETNR EQQLNSEFSM
KAAGHMSEEY RNRVDMFSEK YKSKYTNERR WTDQEMLLLL EAIEMFPDDW NRVSEHVGTR
TPEECVTRFL FLPIEDPYLE SEDEKALGPL AYQPFPFSKS GNPVMSAVAF LASVVDPRVA
SAAAKAALEE FGKDRDEIPP ALLLAHTKNL EAVYAETGKL DSEIGLAYSG IAGTGEEDED
SLKKEQYNEN DNNQDSENSK DQETEEQSES VAHDDINTVN LMPSEDSDVI SENKKRIQAA
AAAALGAAAA KAKHLASVEE RRIKALIAAL VETQMKKQEV KLRHFEELET LMDREHDTLE
QQRQSLLQER QQFYLDQLRS VEIRARHQAQ AELIRDGLLP HTFQLNFDQV PLARPIEPPL
QQVDSENKDQ IVTKDAVVSP KLERATTNGE SSTAAASQNE VHQEEPVTSN VMQACSPSSH
LQPQTHQQQQ QQQPQQQQQQ QQQQQQQQQQ QQQQPQLQPQ PQPQPPLQPQ QQPQLQPQPQ
LQPQPQLQPQ PQLQPQPQLQ PQPQPQLQQQ PPQQVMHPAH APTPATVAAA AMNVGSAGSY
MQQPQTQPPI AAQSYPPPPT PQQPQQIVPG MFPPQQQQSS GYPGQQQYSA GPGPQYNYGP
QPTAGPQLGP PPQQQTFGQY PPGAQQPVGY PPQGYGTPNP PRQQFIPQQY PPPPPQQQQA
LQMSAGGYGP RGPPAQQHYV QQQVFAQRGS PYQTQASVSY GQYTAAGPMN MAAMNPANSG
FPGNQSPQPG YRPSSLVESY PPQQPGQPSP QDHHQLTAAQ SGPHTPQMQQ QQQQQAAQQY
SNPHTPMSTQ MAAMSPMQIS GAMPPGAAGQ QPPHNSAEC
//
