ID A0A0V0YJ39_TRIPS Unreviewed; 1433 AA.
AC A0A0V0YJ39;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=E3 ubiquitin-protein ligase RBBP6 {ECO:0000313|EMBL:KRY00003.1};
DE Flags: Fragment;
GN Name=Rbbp6 {ECO:0000313|EMBL:KRY00003.1};
GN ORFNames=T4E_1269 {ECO:0000313|EMBL:KRY00003.1};
OS Trichinella pseudospiralis (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6337 {ECO:0000313|EMBL:KRY00003.1, ECO:0000313|Proteomes:UP000054815};
RN [1] {ECO:0000313|EMBL:KRY00003.1, ECO:0000313|Proteomes:UP000054815}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS141 {ECO:0000313|EMBL:KRY00003.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY00003.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDU01000011; KRY00003.1; -; Genomic_DNA.
DR STRING; 6337.A0A0V0YJ39; -.
DR Proteomes; UP000054815; Unassembled WGS sequence.
DR GO; GO:0019899; F:enzyme binding; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16620; vRING-HC-C4C4_RBBP6; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014891; DWNN_domain.
DR InterPro; IPR025829; Zn_knuckle_CX2CX3GHX4C.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15439; RETINOBLASTOMA-BINDING PROTEIN 6; 1.
DR PANTHER; PTHR15439:SF0; SOMETHING THAT STICKS LIKE GLUE, ISOFORM A; 1.
DR Pfam; PF08783; DWNN; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR Pfam; PF13696; zf-CCHC_2; 1.
DR SMART; SM01180; DWNN; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51282; DWNN; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054815};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}.
FT DOMAIN 28..100
FT /note="DWNN"
FT /evidence="ECO:0000259|PROSITE:PS51282"
FT DOMAIN 202..216
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 295..334
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 722..974
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1000..1042
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1055..1433
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 727..741
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 756..810
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 814..877
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 891..908
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 909..923
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 924..944
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 945..969
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1001..1042
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1055..1069
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1092..1143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1192..1230
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1245..1259
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1270..1301
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1363..1397
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1398..1421
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY00003.1"
SQ SEQUENCE 1433 AA; 159053 MW; 4BC9E9CBDA8B30F4 CRC64;
LLFCCLRELV VEAAFVLLFC VVPVMSCIHY KFKSSLDYKT VSFEGLSVTL TNLKRLILEK
EGIRTADFDL KVSNAQTGKE YTEDGGPIMR HTSVVVARVP ADAQRRLPKV WDRSTEGVVV
SSSSSIDSVG FSSLLVRFAF YEFAIGAFLQ FAFINLQKTG KNMTEEERIK LMEKESTREY
DPSKYCKKNV TLTGTPPPSY LCNRCGQTGH WIKFCPTLNV KRTTGIPKNE LLETTPDDPQ
AMMTSIGTFA VPVLHKNAFL IGKKEKPFIS EEDDESLRKP AEASEKEALP TELLCSLCDN
ILKDAVVIPC CGFSFCDQCI RKHLLGKQEC PNCREPAVAA ASLIPNGQLR MAVLKYRREK
DCQNKPAAVH IPMAATMKCP QSLASTSNAA VCKNVAKNSI TAVQAGGGGA GAFSSSKQEN
LLSSKAVKPT VGARGGGVEQ KMNPNVFGSS TKLTNMVPRC ITNHNYNSTN ATAVLVSNNS
TAKSNPKNTG VPLTTVTSAA MKCSALTATA PAAAFLGVAS SNANNAAGVG GGNGNNVVGG
NGGAGAGGGT VMTTKAAVLR ANSPNAPVFP PTIPPYMPQP YYAGFQGLAS YPVSIPPPVL
PVAMPVRPFG TPFPSQPPPP GCTYILLGKL THSRHISHQQ TYDRWWTRSH FAWKKVILYQ
SINKLNRNYR DRDAWDDYLA LKDRLRPSRR TSSDSSRSPR RRRRRSSNFF CFVFNRSSHR
HSSYRKSSRD RYREISKSHS SRRSSSTRHR HDSSRGRRVT AVVEEKRTRE RRKYENDHRH
QKSDQRRDAK DDGSKGSKKK NVDVMKEVVR EASLKPTNMN NQDENESNVN KSQQSVVKTT
DGERSKSIPA VNRQDTKRST AKVATASTNT STSAAVDGKV EATDKRHYSS SSKRSSKHHH
HHHHHHQQQQ QQQQQQQQHR VKRKLSSSTA EGKENLDVHS NLKRKPTPSK SGGSKRRSPA
TTTTTVAGAR NKDDDNDVLV SERLDFCELT EIDVYTLSEC EKSATEPTPG SEKTNNIQQQ
PEQQQQHQEQ QEQPKNNNQK ATTITTTTVE LKARNSNGCQ QQKQQQQQQQ RQTEKKRNHG
QPPAVGGDSR GRSVAEKTHD KKLHRDCNNN GKEEKRDEHR PKKGGGDIVM EKRNRDERPK
VSSLNVVAEE LPAADDDTAS AIVADVNDAD GVGDSGGGGG GGAAAGADAA EVDGNEEGKE
QPEKQETAKV SHHQQEQPND QEKQNEDQDG GKSLNSDSAE NKKEKKRKKQ KRKKKKKDRK
EATSAASSSG KSKKKKKHHR RRRRRQHSRH RRHHRRHNHH RADGSRDQSS SSPPPPRPES
KRHHRKKRSK RADDHTSDTA AGGGGGADNG ELVVDKKKAV KYSKSTYASS SSNNNNNNNN
NNSKHRYAQY NNSGNNHEDL HSRMERRWDA SEEEGRTSSR HKSDGRHRRH RYH
//
