ID A0A0V0Z9F4_9BILA Unreviewed; 958 AA.
AC A0A0V0Z9F4;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=U5 small nuclear ribonucleoprotein helicase {ECO:0000313|EMBL:KRY09092.1};
GN Name=Snrnp200 {ECO:0000313|EMBL:KRY09092.1};
GN ORFNames=T12_16561 {ECO:0000313|EMBL:KRY09092.1};
OS Trichinella patagoniensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY09092.1, ECO:0000313|Proteomes:UP000054783};
RN [1] {ECO:0000313|EMBL:KRY09092.1, ECO:0000313|Proteomes:UP000054783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS2496 {ECO:0000313|EMBL:KRY09092.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY09092.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDQ01000292; KRY09092.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0Z9F4; -.
DR Proteomes; UP000054783; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0010467; P:gene expression; IEA:UniProt.
DR GO; GO:0090304; P:nucleic acid metabolic process; IEA:UniProt.
DR CDD; cd18021; DEXHc_Brr2_2; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 2.60.40.150; C2 domain; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 1.10.3380.10; Sec63 N-terminal domain-like domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004179; Sec63-dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR24075; SEC63 DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR24075:SF5; U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF02889; Sec63; 2.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00973; Sec63; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF158702; Sec63 N-terminal domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KRY09092.1};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KRY09092.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KRY09092.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022806,
KW ECO:0000313|EMBL:KRY09092.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW Ribonucleoprotein {ECO:0000313|EMBL:KRY09092.1}.
FT DOMAIN 159..334
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 958 AA; 109567 MW; 876815855E33E885 CRC64;
MQFPKLELTT HIQPITRSTL RVELTVTPDF QWDEKIHGAS QGFWVFVEDV DCERILHYEY
FLLKQKFAED EHTLKFFVPV FDPMPILYYI HIVSDKWLGA ETILPVSFRH LILPEKYPPP
TELLDLQPLP VSALNNTDLE ELYADEIKSF NPIQTQVFRV FYENKDNVFV GAPHGSGKTI
CAELAILQLF KKNPNGKCVY IAPLEPLCDI VYEKWELKFG KKMGKSVVIL TGETAVDLKL
LAKGQVIIST PEKWDVLSRR WKQRKHVQNV GLYIADDLHF VGGENGPVYE VTCSRMRFMS
TQLDTPLRIV GLSVPLSNAK DVGQWLGCSS QNTFNFHPNV RPMPLEVHIL GFNITHTASR
LDAMAKQVYL SVLKHGGILR PKPMLVFVPT RKQAKVTAVD LLAFAAADAQ PKRFLLVEAT
ELQPFIELIN DETLKETLSC GVGYLHEGIS ENDRRTVERL FDVCAIQVLV ASRSMCYTLR
THAHGVVIMD TQYYSGRHHT YEDYPIFDIL QMIGKANRSD IDEDAKCVLL CQNSKKAFYK
KFLFEPLPIE SHLDHCLHDH FNAEVVTKTI ENKQEAIDYL TWTFLYRRMT QNPNYYNLQG
VSHRHLSDHL SELVEDTLND LEQSKCLAII NDMDVQPLNL GIIAAYYSIH YTTIELFSMS
LTSKTKIRGF LEIISNAAEF ANIPLRQKED VVLSQLNEKI PNKIPNAKFS DPHVKTNLLI
QAHLSRIQLP AELQSDSDEI ILKAVRLIQA AVDVISTNGW LLPALAAMEF SQMITQAMWN
KESYLKQLPH FSNELIKRCA EKGIETIFDI MDMEDEDRNQ LLKLNQTEMS DVAKFCNRYP
NIELSFEVEN RDSIISGQPV KICCNLERED EAVGSVLAPF FPKKKEESWW LLVGQPKQNL
LTSIKRISLQ QKTSTKLDFI APEPGSKQYT LFFMTDSYLG CDQEYKFSID IKGEPTAA
//
