ID A0A0V1A017_9BILA Unreviewed; 895 AA.
AC A0A0V1A017;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 17.
DE SubName: Full=Pre-mRNA-splicing factor 38B {ECO:0000313|EMBL:KRY17731.1};
DE Flags: Fragment;
GN Name=SEC14L2 {ECO:0000313|EMBL:KRY17731.1};
GN ORFNames=T12_3191 {ECO:0000313|EMBL:KRY17731.1};
OS Trichinella patagoniensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY17731.1, ECO:0000313|Proteomes:UP000054783};
RN [1] {ECO:0000313|EMBL:KRY17731.1, ECO:0000313|Proteomes:UP000054783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS2496 {ECO:0000313|EMBL:KRY17731.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the PRP38 family.
CC {ECO:0000256|ARBA:ARBA00006164}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY17731.1}.
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DR EMBL; JYDQ01000057; KRY17731.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1A017; -.
DR Proteomes; UP000054783; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd00170; SEC14; 1.
DR Gene3D; 3.40.525.10; CRAL-TRIO lipid binding domain; 1.
DR Gene3D; 2.60.120.680; GOLD domain; 1.
DR InterPro; IPR001251; CRAL-TRIO_dom.
DR InterPro; IPR036865; CRAL-TRIO_dom_sf.
DR InterPro; IPR036598; GOLD_dom_sf.
DR InterPro; IPR005037; PRP38.
DR PANTHER; PTHR23142:SF2; PRE-MRNA-SPLICING FACTOR 38B; 1.
DR PANTHER; PTHR23142; UNCHARACTERIZED; 1.
DR Pfam; PF00650; CRAL_TRIO; 1.
DR Pfam; PF03371; PRP38; 1.
DR SMART; SM00516; SEC14; 1.
DR SUPFAM; SSF52087; CRAL/TRIO domain; 1.
DR SUPFAM; SSF101576; Supernatant protein factor (SPF), C-terminal domain; 1.
DR PROSITE; PS50191; CRAL_TRIO; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 238..383
FT /note="CRAL-TRIO"
FT /evidence="ECO:0000259|PROSITE:PS50191"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 739..895
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 752..792
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 793..851
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 852..885
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY17731.1"
SQ SEQUENCE 895 AA; 103803 MW; 43FAF81F61A7F995 CRC64;
CCRRVRAGGG TNESGSGFRF EQTGSRCSRH ATQTHRLSAY LFETTPESWC HWPTIQPTAI
CQLKNDWQKL YSPGVAFGGL EFEPAGGSTG RTSLKCIGAT SVTDNPTSSR ELVPTRPTQM
VRRQQNRKVQ LEAGKLELVA ELRQRLGSIL PARYDTEFNL ARWLTSADKV SRSKGNVDLA
EKNLRHHLKF RQALNLNDDQ LPTWDENPIY KHQLLPKGHF EWIASGHFFL WWVDYSTLDM
SALLYTQKST DVLVYHFWKY EQMLRMVNER EAATGHQCTV YAVIDLRQWP FNPLTLLFVN
DGQMSYYANL FHYEHYPDLV QPINLINAPT WISLPYRLVK STMPKDFGDR FRVLNHNYMA
TLLEELPTEV VPESMGGTNK ARQNFETIPS KYPLPGSCEH RIEVKRLADE AHHFHVNARR
RHLIPVECQA GWTLQWRFTT DSALMFGIFF KPASGEQKLP TKPTDLDKLE MVYPLLRFAA
KFVPESGQLK CSTSGTYYLA FCNKSSWWSR RHIHLELHVE SQVTAAENAA LYAAVGIKCG
SKHNTLNFWG NKETMNLNHL VLENIVSSPY YKNTLLPLKT HFEVIDEIYY NVEHLEPWEK
GTRKTTGQTG MCGGVRGVGA GGVVSSAFCL LYKLFTLKLT RKQLTALLNH PDSCYIRGLG
FMYIRFCLHP ATFWSWYEPY FDDSEEIDPK AGGGDLMTIG EMVKSLLTKL DWYSTLFPRI
PVPIQKEIDL KLRALSSRKV DRPVAESEQP QWMERGLRHR SDRDRRSESV KERSPSRISS
PEDREWKYRA SRRSHSRSSS RRSSSYRRRD RSHRQHSSRE RRKHKHSDHS RHHRKHKSHR
HRHHRRHHRQ RRESERQESS DDREKSTSSE CAEKKVKKDS LPVPDSEIEE GMISD
//
