ID A0A0V1A1K5_9BILA Unreviewed; 2055 AA.
AC A0A0V1A1K5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Condensin complex subunit 1 {ECO:0000313|EMBL:KRY18275.1};
GN Name=Ncapd2 {ECO:0000313|EMBL:KRY18275.1};
GN ORFNames=T12_14212 {ECO:0000313|EMBL:KRY18275.1};
OS Trichinella patagoniensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY18275.1, ECO:0000313|Proteomes:UP000054783};
RN [1] {ECO:0000313|EMBL:KRY18275.1, ECO:0000313|Proteomes:UP000054783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS2496 {ECO:0000313|EMBL:KRY18275.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY18275.1}.
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DR EMBL; JYDQ01000049; KRY18275.1; -; Genomic_DNA.
DR STRING; 990121.A0A0V1A1K5; -.
DR Proteomes; UP000054783; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR InterPro; IPR024324; Condensin_cplx_su1_N.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF2; CONDENSIN COMPLEX SUBUNIT 1; 1.
DR Pfam; PF12717; Cnd1; 1.
DR Pfam; PF12922; Cnd1_N; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 4: Predicted;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Cell division {ECO:0000256|ARBA:ARBA00022618};
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 58..78
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 84..101
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 98..217
FT /note="Condensin complex subunit 1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12922"
FT DOMAIN 1054..1200
FT /note="Condensin complex subunit 1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF12717"
FT REGION 1365..1551
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1570..1607
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1620..1788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1819..1993
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2011..2041
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1365..1380
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1381..1406
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1411..1438
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1449..1513
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1534..1551
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1652..1670
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1675..1689
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1714..1737
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1751..1788
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1831..1881
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1882..1896
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1897..1924
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1925..1944
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1976..1991
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2024..2041
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2055 AA; 234464 MW; 90C668540F8C72AB CRC64;
MDTEFSFPCS FKDLVVNRNE EFYVEVLSDK DIILSKFQEY KDSYDTNLLE NFVSNFNVFY
SAIEFVDFFI VLIVLYAFVV RVVLHIYIIN MFFFIVNSNI YHELVNLLDD FAECSAYSKQ
SLRNIFSMNM FLLIHLALEF ENEKPQKCAE VQLSDESKKG GKGKRVVQNN DLWSDESQGF
LELCCRILSL DLKKLWAPAL VDERLIDGIG EFCQKMLHPW KAPRKQCLLK AFDLLIHTYN
HGITFAVQLI QSLAAADTNP EKIAEMVSNL ANSDSETFLV EILKELSQVD AAALLNEGAS
ARNYSVFLVE VAHLIPDCVL RNISLLVPFL TEDSFTFRNG VLTTFSVLIS KKLTGEDLPE
SLVTLRTQFF KHLLEHIHDI SGNVRGKALQ LFTKLVLEKC VPLNEYKLLM PLAIGRLADK
LPTVRKAAIQ LLCSILNNNP FMKKVTIEEL QSRLETEKKN LENLVYSGLT RFKGNKESEA
QDSVNEKWTI ARNRMSDILD ELIEKYWEDG SLNLPDELCN FEDVSDIISL SALNCIVDGD
YRETVLRFIH FGKLHPDSAL LASVFDTHCT SAEFKRNLLD AIKFVFMDLI TASVIADGPL
AEEIREKVMQ GDQVQRQKVV IRFIEDSICF LQQVHSILPL ITEMLYQNQL SDVLESIDFL
VNCVSHDVSS NNETIWKCFE LVWSTQEAVR NGALNAFQKI CVDIGSEFNA SYIIEMRIQR
LLIIMEKATD SQYFTLAKLV SIALKKGILE NFNLMPAWDI IQNNKDTLEK KKIALKIICM
FAVHDKNVLR GNIKRLAVFG LSENADFHST YLVLCTLSKL GWCDRQGNLK FLEEIACEVE
ECSLFCRVMR FLLDGVTNYD DNYWIAAMEY GVRLIFYAAP NPDVICASFL KSLSAKSEEE
SKKEQHYPLF LTRMLSAFGQ VAYCSFHFLD MSFSNQLKKS RNTNEQVNNN EKKSVDSVFG
LDTVASLEDR DRDFVNKICE EYVLKDGTFL GEYSKLVIKI CKQPIKYNYA PLQAAVAETL
MKLMFISQKF CAENCRLLVT MLEKSKFPIV RRTIMTLLPD LYARHPNEIE YWTRRIHSRI
FDENLSVRVC SISIMSYLVL HNLTKPGRML ADIALCTVDE NPTIVSLAKR FFKEYSDKTA
TFFSILPDIS GQLSLKYNEI GAEKSWQICK FLYSFVNKER QNESFIDKLC ERFVIAKNVE
HCHILAKCLT LPTYNERLIR KVAESMKCYE EKLKDDTVLQ CFLSIVDSAK RTWKGDGKER
LDMLQAEFKE KHEKYQATEM HFAADNSILN PEEPVVVEVS STEPGPTENV GQAYVNKLRL
SLHHHMESAE WSFLKTICPD LDDTIADMDL NGKDEADTQL KTAVEDSENA VDKQKSSDEM
VNNDKTNAND GRLSVTTDLN STKTKAAASR PRKRMAFDDD SFSVSKRADD DQRDSTSDKE
ITSQSVLRND NNKKEKSLLE KRKATKNASK KSQSAADDRV ENLTENSDDE PAMTKKPKKT
NMKTDRRSID TEKSSVTKQQ STSTSKDSTL KKSKHRKYFI QESSSESDDD SKEHNFFAYL
TKFNIKTPFD SSKVSEVDEN TAKRRAQKKK KKKGFLSSSH DDDSSCNFFE EAPITKSSIL
MKRQKGKREL SSESEEEEEE VSGMRTRLST LRSRQLKAER NKKEQRKLKA AKNASAMQID
SSSSDSEHEL LNSFKLHFGA AQRGKKLNGS KVESKETTKS SSYLRPNIMN WDDITNSMNR
STRKRRESSG NISDGSGSRS SNSSSSSGSS SDDGGKMEML NTTASQRRNI VKNFQKARQA
GHVSRRTLFE MSQRSFEFAK NISDKEQQQS SSRVFSEKKR SPELRSTKRK LNTKAVEEKK
EDESIEVKKK KTDKDTKIRS GGSGKLKNTA AASTKSENKS ESRKRKADLN LFESDDESVD
CISEKSKFKN ISSSSSSYAT RSRRTSFRKN VKTKGTIEEK EEDKDEEATD DADDTASDIA
EPKKKVYKKS ELPSSSSRIL IFFLKRSNRR RKSVDRRRNL TLTPSKKVHS SDSVAEVSTS
STYSLRSGKK LNYKL
//
