ID A0A0V1A323_9BILA Unreviewed; 707 AA.
AC A0A0V1A323;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Nuclear receptor subfamily 4 group A member 1 {ECO:0000313|EMBL:KRY19259.1};
DE Flags: Fragment;
GN Name=NR4A1 {ECO:0000313|EMBL:KRY19259.1};
GN ORFNames=T12_5441 {ECO:0000313|EMBL:KRY19259.1};
OS Trichinella patagoniensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY19259.1, ECO:0000313|Proteomes:UP000054783};
RN [1] {ECO:0000313|EMBL:KRY19259.1, ECO:0000313|Proteomes:UP000054783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS2496 {ECO:0000313|EMBL:KRY19259.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU004334}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000256|RuleBase:RU004334}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY19259.1}.
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DR EMBL; JYDQ01000037; KRY19259.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1A323; -.
DR STRING; 990121.A0A0V1A323; -.
DR Proteomes; UP000054783; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0004879; F:nuclear receptor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd06969; NR_DBD_NGFI-B; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR Gene3D; 1.10.565.10; Retinoid X Receptor; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR003070; NR4A1-3.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001723; Nuclear_hrmn_rcpt.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR24085; NUCLEAR HORMONE RECEPTOR; 1.
DR PANTHER; PTHR24085:SF4; NUCLEAR HORMONE RECEPTOR HR38-RELATED; 1.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR01284; NUCLEARECPTR.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU004334};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU004334};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU004334};
KW Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|RuleBase:RU004334};
KW Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU004334};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU004334};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU004334};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|RuleBase:RU004334}.
FT DOMAIN 354..429
FT /note="Nuclear receptor"
FT /evidence="ECO:0000259|PROSITE:PS51030"
FT DOMAIN 450..684
FT /note="NR LBD"
FT /evidence="ECO:0000259|PROSITE:PS51843"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY19259.1"
SQ SEQUENCE 707 AA; 77478 MW; 9E15FCC74E5CC2AD CRC64;
LRNLYLCMSS EAWFTSESYT TTTATTTTNT TTTATTITTT TTTTTTSSFS SSEQKGKEES
IFCSTLQQQQ SPALYPHSSK QTCSLSNYSS SGMPSMLGTS ETALLSALSE TQPLDKDMLY
VEQMHRARQF FGATPQISGA GQASTFVEEP TTMWCDLPGS SYKMFDRPYR EQQPASGLTV
LPSSCLSSNY VRTEDQYPQL HAAESASSCT QQAPTYFPIA PNEPSLPSTY GYLTGTTTPQ
TAGSRMQQRI TRAFSSPEIE TPQLASMLSA YANPDSMYLS HSLPCVQSTY IPEPNEALLS
NRWEPQTTPP SSHSSSCVSP TCHQVAFFSD TIAHSSSTFG SSSLAPSGSP SQTNQTCAVC
GDHAACQHYG VRTCEGCKGF FKRTVQKNAK YVCMGSRDCV IDKRRRNRCQ YCRFQKCMAV
GMVKEVVRMD SLKGRRGRLP SRSKVADDSS STSLTSSLVH AHMVHVIAKS STEAMAPGDF
FMNTDESLLS SLNYSLAVVH RWAERLPGWS TLSASDQRQL LKAGSMNVMH IRIAYRSMDN
VNESGVGNLT FEDGSVRRVD DFRQFWHPWF NALTSLTCHF GHVLDLDLTA VACLTALAIL
MNGKPNLQSV EMVDQLKNNV LNCLKVHCTY AQVARHKPQY FAKILATLHD LNTISAKLIC
CCQIDKAAGV MLPELLEEAC SFLPTPEQYK SSGTGCIGEP STSLLPP
//
