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Database: UniProt
Entry: A0A0V1A5Y9_9BILA
LinkDB: A0A0V1A5Y9_9BILA
Original site: A0A0V1A5Y9_9BILA 
ID   A0A0V1A5Y9_9BILA        Unreviewed;       539 AA.
AC   A0A0V1A5Y9;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   05-JUN-2019, entry version 14.
DE   SubName: Full=U4/U6.U5 tri-snRNP-associated protein 2 {ECO:0000313|EMBL:KRY19833.1};
GN   Name=Usp39 {ECO:0000313|EMBL:KRY19833.1};
GN   ORFNames=T12_9076 {ECO:0000313|EMBL:KRY19833.1};
OS   Trichinella patagoniensis.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY19833.1, ECO:0000313|Proteomes:UP000054783};
RN   [1] {ECO:0000313|EMBL:KRY19833.1, ECO:0000313|Proteomes:UP000054783}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS2496 {ECO:0000313|EMBL:KRY19833.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KRY19833.1}.
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DR   EMBL; JYDQ01000031; KRY19833.1; -; Genomic_DNA.
DR   Proteomes; UP000054783; Unassembled WGS sequence.
DR   GO; GO:0036459; F:thiol-dependent ubiquitinyl hydrolase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016579; P:protein deubiquitination; IEA:InterPro.
DR   GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR   CDD; cd02669; Peptidase_C19M; 1.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR033809; USP39.
DR   InterPro; IPR028889; USP_dom.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR001607; Znf_UBP.
DR   PANTHER; PTHR21646:SF16; PTHR21646:SF16; 1.
DR   Pfam; PF00443; UCH; 1.
DR   Pfam; PF02148; zf-UBP; 1.
DR   SMART; SM00290; ZnF_UBP; 1.
DR   SUPFAM; SSF54001; SSF54001; 1.
DR   PROSITE; PS50235; USP_3; 1.
DR   PROSITE; PS50271; ZF_UBP; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000054783};
KW   Metal-binding {ECO:0000256|SAAS:SAAS01044152};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW   Zinc {ECO:0000256|SAAS:SAAS01044373};
KW   Zinc-finger {ECO:0000256|SAAS:SAAS01044352}.
FT   DOMAIN       88    149       UBP-type. {ECO:0000259|PROSITE:PS50271}.
FT   DOMAIN      191    523       USP. {ECO:0000259|PROSITE:PS50235}.
FT   ZN_FING      88    149       UBP-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00502}.
FT   REGION        1     23       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A0V1A5Y9}.
SQ   SEQUENCE   539 AA;  62946 MW;  50D3DFAC128DFAB1 CRC64;
     MSDTYHHKNS PEEEEEENGP VKKKFKVEVS AEKLNVSKNP DHVNEVDNHV DEEESTLTLP
     SEPQLNLSRS CPYLDSINRQ VLDFDFEKLC SVSLSHLNVY ACLVCGKYFQ GRGNNTHAYT
     HSVDIGHRVF LNLQTLRFYC LPDNYEIIDS SLDDIKYVLK PTYSPEHINT LSSNTKLSRA
     FDGTTYYPGM VGLNIIKAND YMNVILQALA HVPPLRDYFL CEDNYKNVKR PPGDKMVLLY
     QRFGELIRKM WNPRNFKAHV SPHEMLQAVV LCSNKRFQIT EQGDAIDVLS WLLNALHVSL
     NGTNRTDSSI IYRTFRGKMR TFKRQVLPVD ANEEERTRLL LTEEYQERVQ NLPFLFLTLD
     LPPAPLYRDE FFQNIIPQVP LAALLAKFNG ITEKEYKTYN ENIMKRFEIT HLPPYLIMFV
     KRFTKNHFYV EKNPTIVNFP IRNVDLYDYL SEDGKKRHPY TTYDMIANIV HDGKPDPGEG
     SYRIQLVHKG TGKWFELEDL HVKEILPQMI TLTESYIQVW EMNFEKTRDQ RSGEETMEE
//
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