ID A0A0V1BMP0_TRISP Unreviewed; 538 AA.
AC A0A0V1BMP0;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Iroquois-class homeodomain protein IRX-6 {ECO:0000313|EMBL:KRY38250.1};
DE Flags: Fragment;
GN Name=Irx6 {ECO:0000313|EMBL:KRY38250.1};
GN ORFNames=T01_2156 {ECO:0000313|EMBL:KRY38250.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY38250.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY38250.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY38250.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/IRO homeobox family.
CC {ECO:0000256|ARBA:ARBA00008446}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY38250.1}.
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DR EMBL; JYDH01000027; KRY38250.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1BMP0; -.
DR STRING; 6334.A0A0V1BMP0; -.
DR eggNOG; KOG0773; Eukaryota.
DR InParanoid; A0A0V1BMP0; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR PANTHER; PTHR11211:SF40; HOMEOBOX PROTEIN ARAUCAN-RELATED; 1.
DR PANTHER; PTHR11211; IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT DOMAIN 202..265
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 204..266
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 266..356
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..284
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..337
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY38250.1"
SQ SEQUENCE 538 AA; 58727 MW; 7858D9E8EB268403 CRC64;
LWYGELLASF ARNYSSPRQV NLESRACSRF LLFAFSIVTM SFGQALPYGM NPQLFLSSSS
STSASSSNAK SSPSSRPDAT QIPTQHSLIN SGTLSLNGTE MSADTLRLLA ASYGLPSQML
TTAGSTLDQF RTPGAFPHGF TLGFYPNVSP TAAAAAMDLK VAAEGVSPVL QSSAQTLPAY
YLDPALTASY QYAADRFANP LDLNAARRKN ATRETTAALK SWLYEHRKNP YPTKGEKIML
AIITKMTLTQ VSTWFANARR RLKKENKMTW SPRNRSEEDE EQPSTGRVNG SASMEEDPLD
DLLESEERTL TGESDKPDDD RQTLWESQDE NEKGADSSKR QQTSSPAEQK PSAKKSKIWS
IVEDTVNAVS PVPPRSQTVG ELETVQQQQQ QQQQQQQQQQ QQQQHQQQQH SANLAAFNHW
QQLAAASLYQ QRLPSSLVPS LIGYPYSSAA LRPEIFGRCV VPPPPPSLPN PHAHSFLNLA
IPSGLTNVAV ADNRMTANMP CFGSLSPADI VAAATVPPTS VNDGTRIKVD GCRTTAAT
//
