ID   A0A0V1BSY2_TRISP        Unreviewed;      1285 AA.
AC   A0A0V1BSY2;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=Splicing factor 3B subunit 3 {ECO:0000256|ARBA:ARBA00040929};
GN   Name=SF3B3 {ECO:0000313|EMBL:KRY40141.1};
GN   ORFNames=T01_13042 {ECO:0000313|EMBL:KRY40141.1};
OS   Trichinella spiralis (Trichina worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY40141.1, ECO:0000313|Proteomes:UP000054776};
RN   [1] {ECO:0000313|EMBL:KRY40141.1, ECO:0000313|Proteomes:UP000054776}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS3 {ECO:0000313|EMBL:KRY40141.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY40141.1}.
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DR   EMBL; JYDH01000014; KRY40141.1; -; Genomic_DNA.
DR   Proteomes; UP000054776; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT   DOMAIN          134..667
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          931..1251
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1285 AA;  143947 MW;  CE7387C7767A7AF3 CRC64;
     MDKMNIPNKL PTPTNSFFVQ LSFESIGHNN SRKLTSSNNS THIALLFHAY LKTKTTFNMH
     LYNITLQKPT SIYNAISGNF SGVKLQEICV SRGHLLELLK PDPMTGKLSV IISHECFGII
     RSLSSFRLTG SSKDYIVVGS DSGRIVILEY IPDKNIFTKV HQETFGKSGC RRIVPGQYLT
     VDPKGRAIMI GATEKQKLVY IMNRDSAARL TISSPLEAHK SQSICFQIVG VDVGFENPLF
     ACLEVDYEEI DSVNTEVGKA IQTLTFYELD LGLNHVVRKY AEPLDYFANH LIAVPGGSEG
     PSGVILCCEN YIIYKNLGEQ LDVRCPIPRR RVYANLYLFF SFTIYLIYFS SQNDLEDPDR
     GILVVCSVSH KMKNAFFFLL QTEQGDIFKV TLEVFDDIVT EIKIKYFDTL PVANSICMLK
     SGFLFVASEF GNHNLYQIAK LGDNDDETEF SSLMPLDEGD TFFFAPRGLQ NLIQVDELLS
     LSPIMSFEVA DIVYEDTPQL YAACGRGPRS SIKVLRHGLE VTEMAISELP GNPNAVWTVK
     KHQDAEYDAY IVVSFVNATL VLSIGETVEE VTDSGFLGTT PTLSCSLLGN DSLLQIYPEG
     IRHIRCDRRV NEWKVPGRRV ITNCAVNCRQ VLIALNGGEI VYFELDEGGQ LNEYTERKEM
     PCDVVAMALA DIPPGEIRCR FLAVALTDRT VRVISLDPSD CLTPLNMQSL PAMAQSLCIA
     AVGGDTMEST LFLNIGLENG VLLRTVLDSV TGELQDTRTR YLGMKPVKLF KVKMHDNIAI
     IAMSSRAWLL YKYQTRYHLT PLSYIPLEYA SNFASDQCPE GVVAIAGNSL RILAIENLGT
     IFNYSSFQLS HTPRRFVFHP ETGNIITVET DHNSLTTQTK MKRREILAKE MIELAGEDEK
     EIAAEMSQAF LEEDLPEVQF GTPRAGNGTW ASVINVLSAS DGHNLFKVEL EQNEAAFCMA
     LVQFACHPEA PLLLVGGAVN YNLRPRKVES GFIYTYTISA LGDRLEMMHR TTVDEAVTAL
     ASFRGRLLAS AGKMLRIYDL GKKKLLRKCE NKHMPNLITH ILTMGHRIFV GDVQESVFFY
     RYKPIENQLV VFADDTHQRF CSAMCILDYD TVAVGDKFGN ISILRLPSDC TDDVQEDPTG
     IRALWDKGIL NGASQKCEMV ATFYVGECVT CLQKAMLIPG SSESLVYSTM SGMIGALVPF
     SSKEDYEFFQ HLEMHLRTEY PPLCGRDHLA YRSFYAPVKG VIDGDLCEQY CLLEYGKQKE
     ISNELDRVPS EIMKKLEDIR NRYAF
//