ID A0A0V1BT36_TRISP Unreviewed; 1269 AA.
AC A0A0V1BT36;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=Splicing factor 3B subunit 3 {ECO:0000256|ARBA:ARBA00040929};
GN Name=SF3B3 {ECO:0000313|EMBL:KRY40144.1};
GN ORFNames=T01_13042 {ECO:0000313|EMBL:KRY40144.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY40144.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY40144.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY40144.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RSE1 family.
CC {ECO:0000256|ARBA:ARBA00038266}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY40144.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDH01000014; KRY40144.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1BT36; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 1.10.150.910; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR Pfam; PF03178; CPSF_A; 1.
DR Pfam; PF10433; MMS1_N; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT DOMAIN 134..646
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT DOMAIN 915..1235
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03178"
SQ SEQUENCE 1269 AA; 141955 MW; 7D995DDEF9DEB7C6 CRC64;
MDKMNIPNKL PTPTNSFFVQ LSFESIGHNN SRKLTSSNNS THIALLFHAY LKTKTTFNMH
LYNITLQKPT SIYNAISGNF SGVKLQEICV SRGHLLELLK PDPMTGKLSV IISHECFGII
RSLSSFRLTG SSKDYIVVGS DSGRIVILEY IPDKNIFTKV HQETFGKSGC RRIVPGQYLT
VDPKGRAIMI GATEKQKLVY IMNRDSAARL TISSPLEAHK SQSICFQIVG VDVGFENPLF
ACLEVDYEEI DSVNTEVGKA IQTLTFYELD LGLNHVVRKY AEPLDYFANH LIAVPGGSEG
PSGVILCCEN YIIYKNLGEQ LDVRCPIPRR RNDLEDPDRG ILVVCSVSHK MKNAFFFLLQ
TEQGDIFKVT LEVFDDIVTE IKIKYFDTLP VANSICMLKS GFLFVASEFG NHNLYQIAKL
GDNDDETEFS SLMPLDEGDT FFFAPRGLQN LIQVDELLSL SPIMSFEVAD IVYEDTPQLY
AACGRGPRSS IKVLRHGLEV TEMAISELPG NPNAVWTVKK HQDAEYDAYI VVSFVNATLV
LSIGETVEEV TDSGFLGTTP TLSCSLLGND SLLQIYPEGI RHIRCDRRVN EWKVPGRRVI
TNCAVNCRQV LIALNGGEIV YFELDEGGQL NEYTERKEMP CDVVAMALAD IPPGEIRCRF
LAVALTDRTV RVISLDPSDC LTPLNMQSLP AMAQSLCIAA VGGDTMESTL FLNIGLEVNK
FTNGVLLRTV LDSVTGELQD TRTRYLGMKP VKLFKVKMHD NIAIIAMSSR AWLLYKYQTR
YHLTPLSYIP LEYASNFASD QCPEGVVAIA GNSLRILAIE NLGTIFNYSS FQLSHTPRRF
VFHPETGNII TVETDHNSLT TQTKMKRREI LAKEMIELAG EDEKEIAAEM SQAFLEEDLP
EVQFGTPRAG NGTWASVINV LSASDGHNLF KVELEQNEAA FCMALVQFAC HPEAPLLLVG
GAVNYNLRPR KVESGFIYTY TISALGDRLE MMHRTTVDEA VTALASFRGR LLASAGKMLR
IYDLGKKKLL RKCENKHMPN LITHILTMGH RIFVGDVQES VFFYRYKPIE NQLVVFADDT
HQRFCSAMCI LDYDTVAVGD KFGNISILRL PSDCTDDVQE DPTGIRALWD KGILNGASQK
CEMVATFYVG ECVTCLQKAM LIPGSSESLV YSTMSGMIGA LVPFSSKEDY EFFQHLEMHL
RTEYPPLCGR DHLAYRSFYA PVKGVIDGDL CEQYCLLEYG KQKEISNELD RVPSEIMKKL
EDIRNRYAF
//