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Database: UniProt
Entry: A0A0V1BT36_TRISP
LinkDB: A0A0V1BT36_TRISP
Original site: A0A0V1BT36_TRISP 
ID   A0A0V1BT36_TRISP        Unreviewed;      1269 AA.
AC   A0A0V1BT36;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=Splicing factor 3B subunit 3 {ECO:0000256|ARBA:ARBA00040929};
GN   Name=SF3B3 {ECO:0000313|EMBL:KRY40144.1};
GN   ORFNames=T01_13042 {ECO:0000313|EMBL:KRY40144.1};
OS   Trichinella spiralis (Trichina worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY40144.1, ECO:0000313|Proteomes:UP000054776};
RN   [1] {ECO:0000313|EMBL:KRY40144.1, ECO:0000313|Proteomes:UP000054776}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS3 {ECO:0000313|EMBL:KRY40144.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY40144.1}.
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DR   EMBL; JYDH01000014; KRY40144.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V1BT36; -.
DR   Proteomes; UP000054776; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT   DOMAIN          134..646
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          915..1235
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1269 AA;  141955 MW;  7D995DDEF9DEB7C6 CRC64;
     MDKMNIPNKL PTPTNSFFVQ LSFESIGHNN SRKLTSSNNS THIALLFHAY LKTKTTFNMH
     LYNITLQKPT SIYNAISGNF SGVKLQEICV SRGHLLELLK PDPMTGKLSV IISHECFGII
     RSLSSFRLTG SSKDYIVVGS DSGRIVILEY IPDKNIFTKV HQETFGKSGC RRIVPGQYLT
     VDPKGRAIMI GATEKQKLVY IMNRDSAARL TISSPLEAHK SQSICFQIVG VDVGFENPLF
     ACLEVDYEEI DSVNTEVGKA IQTLTFYELD LGLNHVVRKY AEPLDYFANH LIAVPGGSEG
     PSGVILCCEN YIIYKNLGEQ LDVRCPIPRR RNDLEDPDRG ILVVCSVSHK MKNAFFFLLQ
     TEQGDIFKVT LEVFDDIVTE IKIKYFDTLP VANSICMLKS GFLFVASEFG NHNLYQIAKL
     GDNDDETEFS SLMPLDEGDT FFFAPRGLQN LIQVDELLSL SPIMSFEVAD IVYEDTPQLY
     AACGRGPRSS IKVLRHGLEV TEMAISELPG NPNAVWTVKK HQDAEYDAYI VVSFVNATLV
     LSIGETVEEV TDSGFLGTTP TLSCSLLGND SLLQIYPEGI RHIRCDRRVN EWKVPGRRVI
     TNCAVNCRQV LIALNGGEIV YFELDEGGQL NEYTERKEMP CDVVAMALAD IPPGEIRCRF
     LAVALTDRTV RVISLDPSDC LTPLNMQSLP AMAQSLCIAA VGGDTMESTL FLNIGLEVNK
     FTNGVLLRTV LDSVTGELQD TRTRYLGMKP VKLFKVKMHD NIAIIAMSSR AWLLYKYQTR
     YHLTPLSYIP LEYASNFASD QCPEGVVAIA GNSLRILAIE NLGTIFNYSS FQLSHTPRRF
     VFHPETGNII TVETDHNSLT TQTKMKRREI LAKEMIELAG EDEKEIAAEM SQAFLEEDLP
     EVQFGTPRAG NGTWASVINV LSASDGHNLF KVELEQNEAA FCMALVQFAC HPEAPLLLVG
     GAVNYNLRPR KVESGFIYTY TISALGDRLE MMHRTTVDEA VTALASFRGR LLASAGKMLR
     IYDLGKKKLL RKCENKHMPN LITHILTMGH RIFVGDVQES VFFYRYKPIE NQLVVFADDT
     HQRFCSAMCI LDYDTVAVGD KFGNISILRL PSDCTDDVQE DPTGIRALWD KGILNGASQK
     CEMVATFYVG ECVTCLQKAM LIPGSSESLV YSTMSGMIGA LVPFSSKEDY EFFQHLEMHL
     RTEYPPLCGR DHLAYRSFYA PVKGVIDGDL CEQYCLLEYG KQKEISNELD RVPSEIMKKL
     EDIRNRYAF
//
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