ID   A0A0V1BUG4_TRISP        Unreviewed;       829 AA.
AC   A0A0V1BUG4;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   SubName: Full=CAP-Gly domain-containing linker protein 1 {ECO:0000313|EMBL:KRY40529.1};
GN   Name=CLIP1 {ECO:0000313|EMBL:KRY40529.1};
GN   ORFNames=T01_9251 {ECO:0000313|EMBL:KRY40529.1};
OS   Trichinella spiralis (Trichina worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY40529.1, ECO:0000313|Proteomes:UP000054776};
RN   [1] {ECO:0000313|EMBL:KRY40529.1, ECO:0000313|Proteomes:UP000054776}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS3 {ECO:0000313|EMBL:KRY40529.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY40529.1}.
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DR   EMBL; JYDH01000012; KRY40529.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V1BUG4; -.
DR   STRING; 6334.A0A0V1BUG4; -.
DR   InParanoid; A0A0V1BUG4; -.
DR   Proteomes; UP000054776; Unassembled WGS sequence.
DR   Gene3D; 2.30.30.190; CAP Gly-rich-like domain; 2.
DR   InterPro; IPR036859; CAP-Gly_dom_sf.
DR   InterPro; IPR000938; CAP-Gly_domain.
DR   InterPro; IPR032108; CLIP1_ZNF.
DR   PANTHER; PTHR18916; DYNACTIN 1-RELATED MICROTUBULE-BINDING; 1.
DR   PANTHER; PTHR18916:SF94; RESTIN HOMOLOG; 1.
DR   Pfam; PF01302; CAP_GLY; 2.
DR   Pfam; PF16641; CLIP1_ZNF; 2.
DR   SMART; SM01052; CAP_GLY; 2.
DR   SUPFAM; SSF74924; Cap-Gly domain; 2.
DR   PROSITE; PS00845; CAP_GLY_1; 1.
DR   PROSITE; PS50245; CAP_GLY_2; 2.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT   DOMAIN          77..119
FT                   /note="CAP-Gly"
FT                   /evidence="ECO:0000259|PROSITE:PS50245"
FT   DOMAIN          178..220
FT                   /note="CAP-Gly"
FT                   /evidence="ECO:0000259|PROSITE:PS50245"
FT   REGION          300..319
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          608..635
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        304..319
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   829 AA;  94101 MW;  92760EA504EB781A CRC64;
     MSYYFTLCCS KAVMEKEDSK KPLKKSAIPR YANAKLLTRI NSKESLLSVS SCVASKWLVG
     DRCYVGGTVP GRIAFVGDTR FAPGEWAGVV LDEPVGKNNG SVAGVMYFQC APNYGLFCRL
     SKLSKQPVVI QQPDAASAFH DESQQESAST AAEEDHNLRV GDRVSAGGCR RGVLRFLGPT
     DFAEGIWAGI ELDQPYGKND GSVHRKRYFT CKPLYGLFAP AHKVVLETFP NFDTETGKKT
     PIVRHNVASI VRTRRNQSLM GSQESLTSLS SIHSSASRRI RLGVNALSTS CNTPLKNDLR
     RLKSDSLSPN SSSSTPTVTA LHNALKEKEQ HVEQLIQERD ADRSELAQLL KTLEQTKNEV
     ENLREEEKRT ADDFRIKIDF LQTALETSEK ECKHWREMCE TEKQKADDLE FRMEEEMCLK
     NDLKLRLSAL EEERNKTESQ ELMTMEKYKN LQEEMKILSA EHDQLKKELC DLRTLNSNAE
     INDIKENNSK LEEKCKILME NFDNVQKNNA NLHHMLDQAK QELIQAKEIA QKEKENASTY
     AEKLKELENS MLKQKVLSES NAVSVDRKDS STSFDMELCT AFSKIKLNET IESHENKKSE
     EDESSKALLE ANMKLAVLEE KLNSEKNSFS NLDLERRNQI LQLQQQIQKM NPLLESRQKE
     IDALKLDLSE KVDYCCKVDA ELNFLRNEVI SLRQANKQSL SSSKDTQTEC DGLDTVQQSK
     VIEFLESIIA NQKVEIDRFT NHPGLNCSNT LQENFIDPQS DVSALRQLRK FCDVCEIFDA
     HDTEECELYK QELMNHSNYG GDPLALRPYC ERCEMFGHLA ESCSTVKES
//