ID A0A0V1BUI4_TRISP Unreviewed; 1162 AA.
AC A0A0V1BUI4;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 20.
DE SubName: Full=Liprin-alpha {ECO:0000313|EMBL:KRY40853.1};
GN Name=syd-2 {ECO:0000313|EMBL:KRY40853.1};
GN ORFNames=T01_14108 {ECO:0000313|EMBL:KRY40853.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY40853.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY40853.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY40853.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the liprin family. Liprin-alpha subfamily.
CC {ECO:0000256|ARBA:ARBA00007026}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY40853.1}.
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DR EMBL; JYDH01000011; KRY40853.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1BUI4; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR CDD; cd09562; SAM_liprin-alpha1_2_3_4_repeat1; 1.
DR CDD; cd09565; SAM_liprin-alpha1_2_3_4_repeat2; 1.
DR Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 3.
DR InterPro; IPR029515; Liprin.
DR InterPro; IPR037620; Liprin-alpha_SAM_rpt_1.
DR InterPro; IPR037621; Liprin-alpha_SAM_rpt_2.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR PANTHER; PTHR12587; LAR INTERACTING PROTEIN LIP -RELATED PROTEIN; 1.
DR PANTHER; PTHR12587:SF20; LIPRIN-ALPHA, ISOFORM E; 1.
DR Pfam; PF00536; SAM_1; 2.
DR Pfam; PF07647; SAM_2; 1.
DR SMART; SM00454; SAM; 3.
DR SUPFAM; SSF47769; SAM/Pointed domain; 2.
DR PROSITE; PS50105; SAM_DOMAIN; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT DOMAIN 904..970
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 997..1054
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 1078..1147
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT REGION 16..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 221..264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 688..712
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 833..868
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 54..127
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 185..219
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 278..451
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 481..532
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 648..685
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 21..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 235..264
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1162 AA; 132697 MW; 0BA9A3668D3A1B46 CRC64;
MWNLMRCDVM PTISEDGVDN PFGAGQSTSS GLGGAGANET SKFEQIMVNM LDERDKLYEQ
LLECRRQLDE VQGRLNECQK ENDSLRCQLD DTVEPHSKDY HQLVKELKKA NEQLLDREEE
ILELKAERSN TKLLLEHLEC LVSRHERSLR MTVVKRQSQS SADMSSEAEV LKALKSLFEH
HKALDEKVRE RLRVAMEKVS CLEEELARSV QDNATLNQKL RKVKSDYERE SGRASSDGSY
GSQAPATGET SENGPSSEAT STSSHQYVGL QNAYDETKNN LMSTLQRLNE SMNRISKLEE
TLIATRDELA RAQEANRQLH KDLQESMSLK NDQEERLSTV EKRCLSMHRE ASGIQDRNDK
LEQELAAKDA ALRLNEEKVR NLKERLELAE QQLAQSLKRS SSMPLVEAEL QQRMEALTAF
EQKHVSAEER IGRLERQIEE KNAEIVRALQ REKMNEDHNQ RLSATVDKLL SETNERLQLH
LKERMQALED KNRLVQELKE TKKSLLQVDR LKERLQEEKE AMMGELETLR SQLYAARTAQ
IQARLPEIGA QTLPLESSVT RRLRKGRQCI AREDSSKVQT LNEQDWERLQ QAHVLANIHQ
AFTKSPDDAQ IGVGVVASND LDSPLTEIPI DTNHFDDSTP PYEAHSLAAM LQEQIDALNN
EMRFVEEERK DAEEREEQLE DLCRMGGISQ RSLPNDHSYV PYMDSGRSSA RTLATNPDRH
VREDIPQHSP YSTMHHLGAQ FLCQEYDARA VSYEGSKEPA FNRKPVLPDG VVFDNIERHQ
ESPHSSPSSS IPSSLNISSD KHAFNSFSTS TKRSSSAGIR SLGRLFGKKE KVKNSQILQQ
QQQQQQQQQY HQSGYHHHQG GFNSSWPAED SFTNRNAVDF DMRKKKKHEL LDEAIKAQTP
FSKWNGPTIV AWLELWVGMP AWYVAACHAN VKSGAIMSAL SDQEIQREIG ISNPLHRLKL
RLAIQEMVTL TSPSAPRGAH YTSLAFGELN HEWIGNDWLP SLGLSQYRTT FMECLVDARM
LEHLTKKDLR LYLKMVDSFH RASLQYGIFL LKKLNYDRRL IDERRAACET SNTDVFVWTN
ERLMRWVESI NLPMYACNLR ESGVHGALIA CDETFDSNAL ALVLQIPNND HQARQSLQRE
FQCLLQSGTM RRTSSSQTVS SS
//
