ID A0A0V1BYZ8_TRISP Unreviewed; 606 AA.
AC A0A0V1BYZ8;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Tigger transposable element-derived protein 1 {ECO:0000313|EMBL:KRY42287.1};
DE Flags: Fragment;
GN Name=TIGD1 {ECO:0000313|EMBL:KRY42287.1};
GN ORFNames=T01_6264 {ECO:0000313|EMBL:KRY42287.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY42287.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY42287.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY42287.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the tigger transposable element derived protein
CC family. {ECO:0000256|ARBA:ARBA00010881}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY42287.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDH01000004; KRY42287.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1BYZ8; -.
DR InParanoid; A0A0V1BYZ8; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR19303:SF71; DDE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT DOMAIN 109..188
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY42287.1"
FT NON_TER 606
FT /evidence="ECO:0000313|EMBL:KRY42287.1"
SQ SEQUENCE 606 AA; 69507 MW; ED443095B2F7456A CRC64;
LVYGNTGPTI KKAYLEVKNM RFHASTVQRS VGIMQNLRAS VSACRLKRRK NVMNIEQKVK
LLDKLNGGMS FAAAGRMFGI NESTVRYINK NEKAIRAAFT LCAPLTTKVV SQVREKAIIK
MENALYIWLK NQRRKRVPVD SNVIREKARV LYGHFKQAET SASSRSTFTA SKGWLDHFKR
RFSLRSVKMS GEATSAYQFK ASSYPEELKQ LIEEKGFCSE QIFNAAESTL FWKKMPDRAF
IGKEQHHRSV FKAKRDKMTL LFCCNAAGHM VKPGLIYKTA SPRAIKHFDS KSLPVHWMHG
KKAWVTKDLF LDWFHHCFIP ETKRYLSALG LKFKVLLILD NATDHPENLQ FESENVDVAY
LPPDASSHVQ PLDQGVIQTF KAYYTRRTMA RLVAAMDEDS NLEVIDYWKK FSIADCLCHI
KESFTELKVE TVNACWRNLW PDCSNAKTTF LPADEEARAV KMTVALAHQV DADGFKDLQE
SEVIQLIESH TSELTDEQLM EMIATDEDKD ADDDSATDET EKLTLEGLAE ILHTLKQVEE
KLFEMDSDMV RAIKFKRDLK TAAEPYHRLL EEMKKKEEMA ISNSFLKKRR RAVQSAKIAR
RNTPTI
//
