ID A0A0V1CY98_TRIBR Unreviewed; 1849 AA.
AC A0A0V1CY98;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 08-NOV-2023, entry version 19.
DE SubName: Full=C-myc promoter-binding protein {ECO:0000313|EMBL:KRY54094.1};
GN Name=DENND4A {ECO:0000313|EMBL:KRY54094.1};
GN ORFNames=T03_12413 {ECO:0000313|EMBL:KRY54094.1};
OS Trichinella britovi (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=45882 {ECO:0000313|EMBL:KRY54094.1, ECO:0000313|Proteomes:UP000054653};
RN [1] {ECO:0000313|EMBL:KRY54094.1, ECO:0000313|Proteomes:UP000054653}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS120 {ECO:0000313|EMBL:KRY54094.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY54094.1}.
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DR EMBL; JYDI01000074; KRY54094.1; -; Genomic_DNA.
DR STRING; 45882.A0A0V1CY98; -.
DR Proteomes; UP000054653; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.100.10.50; -; 1.
DR Gene3D; 3.40.50.11500; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR001194; cDENN_dom.
DR InterPro; IPR005112; dDENN_dom.
DR InterPro; IPR043153; DENN_C.
DR InterPro; IPR023341; MABP.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR037516; Tripartite_DENN.
DR InterPro; IPR005113; uDENN_dom.
DR PANTHER; PTHR12296; DENN DOMAIN-CONTAINING PROTEIN 4; 1.
DR PANTHER; PTHR12296:SF30; DENN DOMAIN-CONTAINING PROTEIN CRAG; 1.
DR Pfam; PF03455; dDENN; 1.
DR Pfam; PF02141; DENN; 1.
DR Pfam; PF03456; uDENN; 1.
DR SMART; SM00801; dDENN; 1.
DR SMART; SM00799; DENN; 1.
DR SMART; SM00800; uDENN; 1.
DR PROSITE; PS50211; DENN; 1.
DR PROSITE; PS51498; MABP; 1.
DR PROSITE; PS51375; PPR; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054653};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 289..310
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 38..195
FT /note="MABP"
FT /evidence="ECO:0000259|PROSITE:PS51498"
FT DOMAIN 187..671
FT /note="UDENN"
FT /evidence="ECO:0000259|PROSITE:PS50211"
FT REPEAT 844..878
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1144..1166
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1195..1227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1296..1326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1148..1166
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1195..1210
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1212..1227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1296..1319
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1849 AA; 208539 MW; 36F4F14E7D39107E CRC64;
MQDSRRIFEY FLVGGLPENP VELTPGAQEC GYRDNVTLAP ITDIAVIYPS LQETIPDGFE
CVETTPTGHP ADLNHGSLRS PSCYLCYRRG FHKPPIVDIG ILYDGKGDTL MRDSFVLKQT
PNGHMANLNN AKDGIFLTYR RAANNAPSNL LAVSDICVIL ANKGETAPHT FYKINKNLNK
GLVGSDVYVC YKKSLSNVNR IAYMPAMLDR FPSTDFPDYP LPMNVPIFCL PMGAVIECWP
TKCQTPGEQF STFILTDQNG HKLYGASVSF YEDYEKPLTN EQMEKLGKLL FFFFFFFFFL
FRVAAVQFFV PGLNSEGCYL PGSCSDSSST NDPADQMTFH TNKCICVVSR YPFFSAFRRY
LLFLHRMCMG TQNALPVERY ISFLMFEVPF PTFLRPRVLV ELGNERICFD NPEDSPLPLS
GANYLDFLKL LGTENSMYLT LLVLLEQKVL VHSLRPWYLT SVAEAICSLI FPLRWQCPYI
PQCPLDLAGV LHAPLPFVAG VDSCYFELYQ DPPKDVTCVD LDTNTISQSE VRQRLRLSLL
PRKAAKTLKQ RLEALLGEVA RVDFKIRSTH HYLPVDLDLK LRQRRKRLEI EIQEAFLRFM
GTLLKDYQNF LRPIQSAPSV GSTDLQALFD VAGFLRTRDK ASLEFYKLLM NTQLFIRFIE
ERSFLMDKDT NAYLAFFDDC LQKIEHEPAS SFDTSRLLLE LDSDSNADHR AVLFAPPESP
TQNAKNALYY CYDRKFPRLQ QALFQLGTPV DQRSSTVPQS PVPLIAVTPA ARRTKQETKL
ALDFAKKQLA EPLSWAKCLL GYSYSLWFIH LPAFMRVTVD KNKALNAAYC ILKRMESAKL
ASPDEVCYRV LIQMCGLYEN PILAVKVFVS MNQNGVRPNA VTYGIYNRAV LEAKWPGVGG
GLPAQKRWAL LRNVIHAIAL MQRGHLIPNS ASQSGRSHNI RILAKNNIPL HRIPNPDPAD
DAMTKTHSMT NVSQKSKIQD DDNDDVVVEK RENCLEYNES CIGRNDSLTT VSDTDLMPMK
EEEEKKLYPT LQQFNSQIKL CDNFSDHDCC HEKDVDEKNI YKKDLDNFSS STVMQSEIAA
VDDDNFMDGR HPLEIDIDEQ QQQFEIMKMD NAQQQDSVEM KLSSPTGRPL DKYDCTLRPL
FVDEPRTPQI QQKASSKHSY SGSGLSRFGR QSMRDFFTRI NEVATPVSRF VKTPRHADHN
TKHIQESKAP EEDINVNVSD NLRSPSLSSE RSFALSPYLS DRLSNSFAEA QNKMFSKMSQ
FQKNSDSFAK LKSGMSSMVH GIRNFKSLNQ LSGQVRGSKS SLNLNDSNAN CNTNNNNKSE
KRSSIDDGYA TKNTCHGYTD EYSGKKKLPL DDPAFALSSG MVNRMLNFSA MNGNDGGLSS
YQVEVLLCTT SRCPSCKYLV YDDEIMAGWS ADDSELNTTC PFCDMKFVPK LTAVLQPLRS
LALNSWYVKE SANGAETTIA EDEIDDEDEM DNVQDAAQKR DKEKISVSEG CSKSLDALHG
FGSGSSTGGG GGGVSTKGYH HHHQWSKMSR QISLSYGNFF TTFGRSSTKR PLSRQRMVSR
QLFRETDDVG GRPNKLGSFP SLGREMENGN AVDDQKRHVI TVHYLNLIVL RKALENVVIS
DGDGVLTLDE FLETKPILFW NLVYVFQRLG VPTHLVSCAG RFYVSKFYGD VPEPTTPGVT
VRCVHELPTL LHADTDDDGQ QQACGYNHWP KPVYWSLAEQ AGVVELASLV SAEHRFVTRT
LVGQIVESLS SQNLTTPLQL LINEYRRQVS RGTSPTLCLP RHFSMYRDML FVALLQFGKK
LRVDEFDLRY RAAFGKLSPK IAALLPVHDH PPTLSTIACR LVFIPLDVL
//
