ID A0A0V1DIN7_TRIBR Unreviewed; 1391 AA.
AC A0A0V1DIN7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Patched-related protein 9 {ECO:0000313|EMBL:KRY60867.1};
GN Name=ptr-9 {ECO:0000313|EMBL:KRY60867.1};
GN ORFNames=T03_9168 {ECO:0000313|EMBL:KRY60867.1};
OS Trichinella britovi (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=45882 {ECO:0000313|EMBL:KRY60867.1, ECO:0000313|Proteomes:UP000054653};
RN [1] {ECO:0000313|EMBL:KRY60867.1, ECO:0000313|Proteomes:UP000054653}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS120 {ECO:0000313|EMBL:KRY60867.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY60867.1}.
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DR EMBL; JYDI01000003; KRY60867.1; -; Genomic_DNA.
DR Proteomes; UP000054653; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR032245; RMI2.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF96; PATCHED-RELATED PROTEIN 9; 1.
DR Pfam; PF02460; Patched; 3.
DR Pfam; PF16100; RMI2; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054653};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 695..712
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 724..743
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 749..772
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1068..1087
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1093..1113
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1144..1160
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1172..1194
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 690..823
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT REGION 1245..1315
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1331..1357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1245..1263
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1391 AA; 154401 MW; 663C975278986245 CRC64;
MAAHRSGVIR VQYSSTCSNH VSTFDDLANT SGGQPIPEHR LLLCSPIEAL VCITNDYEPS
QIVKWFFSRK RAKIPAAIEI AEPQLHEQPN DLAVHVHHVS TFDDLANTSG GQPIPEHRLL
LCSPIEALVC ITNDYEPSQI VKWFFSRKRA KIPAAIEIAE PQLHEQPNDL AVHVQYSSTC
SSHVSTFDDL ANTSGGQPIP EHRLLLCSPI EALLNGSSSQ TAQNARSSNL LLSRVPYRAL
LYKNIHEILR CDSSVAVTKN CSMSDSVSTT EFVTNFPLRK LFCCHLKFAT FQPTENSWTL
LVDGKSHRIY YIWMQGTLRM RCDEKNVDKK TVIFSDSTGN VDVIIPSSMK QNVSDVSADN
YCSLICELVD KSDDGIVTVK AKKLTPLQFE RKSILEIAWA TELVGYIVGC KVTLVELVAK
LFFHHLGLLI AKYPLPFVIG PVLITVAGMA GIYLNVDLGD IDYDTSMSDF FPDNSQSWEN
MHQLQSVFPT NDDELSTAEA SSFFGISFIF LRRNLVYATL TSSRPNGSVV SEHGLRCVSD
LIRRLKEIQV EHRGVVYKWQ DLCYKRAGGG CVEHPLVQTL TLLGNAGKIR PLMEPLLGYP
TVTLDNVQMD NTPVLGRVTN GDANGKAVVR AAAFRVPMLL REPVDDFQDE LNNLWREQFL
KTVRKIRYPG YNVHCLTWHS VIEEIERNGQ MLSSYFPYLI TILAVLTIGG CCDGDPITSK
PWLGVFGLIS ATFAILTAVG ILFHCRYNYI SMVMMMPFLV LSVSVDNVFL MLSAWRETRQ
FATIDERVAE TVANSAVSIL ITALTDGLSF GIGNLTPFPA VQISNGEDQQ LQIRWPVLQK
FNETLSSTMA SVLCNSASKY FVSIIYLLYV GVVGYGMAGL EVGTAVDDLL PGKSYVAATF
KANDRYFSAY GDFAVAFVDQ PFNLADSELV ERHLNLYRSL TSTVHSSEGQ FWLQQFFDYM
EKKKRDNVNS PNRADNDDQR LQLSLLLGEF FQLAENRHLA SDVQFNDKVA LVVERSKMTV
RLRHVGRSNY SRIASLLRRR FQESALSGFV FHPTFLLIDQ DESVWRTLFQ DVAVAVLIMT
ATVALFVSSL SGVVAVGLAV CSISAGVVAL LSLWQVRVDI ISMITITMSV GLSVDYVAHV
AYHYVSGFLA TAGVSVLILV DSRMVETFVK TVLLAVTVGM FHGLVFLPTL LPLLCPAAGD
HQRRLETRRY SPAFEGPKLP TPVPVPALTV ANNNLLLVLK EPSLSSTSDV DSNYSSASSR
SQRPFPLVAP PAERRHSAHS GISSQALLHN CRPPEDHFPN PKHSEHNSSA GSTLVPVTDP
AQLLNNFHTS AVAVDKPTPR QPDNPKPTST PTAAVDDQRR EQLARMVLQG DTKFHRILQK
ELINRRPPPH L
//