ID A0A0V1HL08_9BILA Unreviewed; 1197 AA.
AC A0A0V1HL08;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 21.
DE SubName: Full=Liprin-alpha {ECO:0000313|EMBL:KRZ10868.1};
GN Name=syd-2 {ECO:0000313|EMBL:KRZ10868.1};
GN ORFNames=T11_6298 {ECO:0000313|EMBL:KRZ10868.1};
OS Trichinella zimbabwensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268475 {ECO:0000313|EMBL:KRZ10868.1, ECO:0000313|Proteomes:UP000055024};
RN [1] {ECO:0000313|EMBL:KRZ10868.1, ECO:0000313|Proteomes:UP000055024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1029 {ECO:0000313|EMBL:KRZ10868.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the liprin family. Liprin-alpha subfamily.
CC {ECO:0000256|ARBA:ARBA00007026}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ10868.1}.
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DR EMBL; JYDP01000055; KRZ10868.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1HL08; -.
DR Proteomes; UP000055024; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR CDD; cd09562; SAM_liprin-alpha1_2_3_4_repeat1; 1.
DR CDD; cd09565; SAM_liprin-alpha1_2_3_4_repeat2; 1.
DR Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 3.
DR InterPro; IPR029515; Liprin.
DR InterPro; IPR037620; Liprin-alpha_SAM_rpt_1.
DR InterPro; IPR037621; Liprin-alpha_SAM_rpt_2.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR PANTHER; PTHR12587; LAR INTERACTING PROTEIN LIP -RELATED PROTEIN; 1.
DR PANTHER; PTHR12587:SF20; LIPRIN-ALPHA, ISOFORM E; 1.
DR Pfam; PF00536; SAM_1; 2.
DR Pfam; PF07647; SAM_2; 1.
DR SMART; SM00454; SAM; 3.
DR SUPFAM; SSF47769; SAM/Pointed domain; 2.
DR PROSITE; PS50105; SAM_DOMAIN; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000055024}.
FT DOMAIN 940..1006
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 1033..1090
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 1114..1183
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT REGION 16..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 719..749
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 864..905
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 68..127
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 185..219
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 278..451
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 481..532
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 679..716
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 21..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 236..264
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 722..746
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1197 AA; 137088 MW; 1C6C1952A5A200D9 CRC64;
MWNLIRCDVM PTISEDGVDN PFGAGQSTSS GLGGAGANET SKFEQIMVNM LDERDKLYEQ
LLECRRQLGE VQGQLSECQK ENDSLRCQLD DTVEPHSKDY HQLVKELKKA NEQLLDREEE
ILELKAERSN TKLLLEHLEC LVSRHERSLR MTVVKRQSQS SADMSSEAEV LKALKSLFEH
HKALDEKVRE RLRVAMEKVS CLEEELARSV QDNATLNQKL RKVKSDYERE AGRASSDGSY
GSQAPASGET SENGPSSEGT SASSHQYVGL QSAYDETKNN LMSTLQRLNE SMNRISKLEE
TLIATRDELA RAQEANRQLH KDLQESMSLK NDQEERLSTV EKRCLSMHRE ASGIQDRNDK
LEQELAAKDA ALRLNEEKVR NLKERLELAE QQLAQSLKRS SSMPLVEAEL QQRMEALTAF
EQKHVSAEER IGRLERQIEE KNAEIVRALQ REKMNEDHNQ RLSATVDKLL SETNERLQLH
LKERMQALED KNRLVQELKE TKKSLLQVDR LKERLQEEKE AMMSELETLR SQLYAARTAQ
IQARLVDLKY FFLIIMRINY YLFFLCFVKF KNHFRMQPEI GAQTLPLESS VTRRLRKGRQ
CIAREDSSKV QTLNEQDWER LQQAHVLANI HQAFTKSPDD AQMGVAVASN DLDSPLTEVP
IDANHFDDST PPYEAHSLAA MLQEQIDALN NEMRFVEEER KDAEEREEQL EDLCRMGGIS
QRSVPNDHSY VPYMDSGRSS TRTLATNPDR HVREDISQHS PYSTMHHLGA QFLCQEYDAR
AVSYEGSKEP AFSRKPVLPD GVVFDNIERH QESPHSSPSS SIPSSLNISS DKHALNSFST
STKRSSSAGI RSLGRLFGKK EKVKNSQILQ QQQQQQQQQQ QQQQYHQSSY HHHHQGGFNS
SWPAEDSFTN RNAVDFDMRK KKKHELLDEA IKAQTPFSKW NGPTIVAWLE LWVGMPAWYV
AACHANVKSG AIMSALSDQE IQREIGISNP LHRLKLRLAI QEMVTLTSPS APRGAHYTSL
AFGELNHEWI GNDWLPSLGL SQYRTTFMEC LVDARMLEHL TKKDLRLYLK MVDSFHRASL
QYGIFLLKKL NYDRRLIDER RAACESSNTD VFVWTNERLM RWVESINLPM YACNLRESGV
HGALIACDET FDSNALALVL QIPNNDHQAR QSLQREFQCL LQSGTMRRTS SSQTVSS
//
