ID A0A0V1HRC9_9BILA Unreviewed; 1495 AA.
AC A0A0V1HRC9;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 29.
DE SubName: Full=Splicing factor 3A subunit 1 {ECO:0000313|EMBL:KRZ12847.1};
DE Flags: Fragment;
GN Name=Sf3a1 {ECO:0000313|EMBL:KRZ12847.1};
GN ORFNames=T11_11905 {ECO:0000313|EMBL:KRZ12847.1};
OS Trichinella zimbabwensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268475 {ECO:0000313|EMBL:KRZ12847.1, ECO:0000313|Proteomes:UP000055024};
RN [1] {ECO:0000313|EMBL:KRZ12847.1, ECO:0000313|Proteomes:UP000055024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1029 {ECO:0000313|EMBL:KRZ12847.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ12847.1}.
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DR EMBL; JYDP01000037; KRZ12847.1; -; Genomic_DNA.
DR Proteomes; UP000055024; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.10.10.790; Surp module; 2.
DR InterPro; IPR000837; AP-1.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR004826; bZIP_Maf.
DR InterPro; IPR046347; bZIP_sf.
DR InterPro; IPR045146; SF3A1.
DR InterPro; IPR022030; SF3A1_dom.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR InterPro; IPR008551; TANGO2.
DR PANTHER; PTHR15316; SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; 1.
DR PANTHER; PTHR15316:SF1; SPLICING FACTOR 3A SUBUNIT 1; 1.
DR Pfam; PF03131; bZIP_Maf; 1.
DR Pfam; PF12230; PRP21_like_P; 1.
DR Pfam; PF01805; Surp; 2.
DR Pfam; PF05742; TANGO2; 1.
DR PRINTS; PR00042; LEUZIPPRFOS.
DR SMART; SM00338; BRLZ; 1.
DR SMART; SM00648; SWAP; 2.
DR SUPFAM; SSF57959; Leucine zipper domain; 1.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR PROSITE; PS50217; BZIP; 1.
DR PROSITE; PS00036; BZIP_BASIC; 1.
DR PROSITE; PS50128; SURP; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000055024};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 99..141
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 205..247
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 1262..1325
FT /note="BZIP"
FT /evidence="ECO:0000259|PROSITE:PS50217"
FT REGION 650..683
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1333..1373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1463..1495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1260..1324
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 652..681
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1351..1373
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ12847.1"
SQ SEQUENCE 1495 AA; 167654 MW; F84940D4A7CE65FC CRC64;
LRLGCPTQKE KNSEIILHYI GRVILKETHY RVVWKMQSLY FVYMLKKLHM PPITGGLDTV
NPVASNGSIP TENPDDLDTS KSGKPIVGVI YPPPEIRNIV DKTASFVARN GFEFESRIRQ
HEINNPKFNF LNPGDPYHAY YQQKIRDIAD GKCTEVQTSK PQAGPTTQSK LQEAIKLVDW
IPRDPPPEFE FIADPTTINA LDLDLIKLTA LFVAKNGRHF LTQLMTRESR NFQFDFLKPQ
HSNFAYFTRL VEQYTKIILP PKDIVQKLEN ECRGMRPVLD LVKQRVDWEQ YQRRIKERED
AEAERERLAY SMIDWHDFVV VQTVDFQPQE TVGLPPPCTP KDVGARILAQ QRMEANKIST
QSIEMEVDSD EEVSGQHLAG DAVENQPFAG GEQGAMAFSN EEGMGALHQQ VPKPKAVHEV
TQPQPAPPRP ENVTVRKDYN PRNRLLEKVQ SEQKWVISPL TGEKVQADKL TEHLKFNTVD
QQYFVQKERE LQERQEEELV FALGSDISAN IKAFAERRSD IFGVGSKGAE QTMIGKKLGE
EDIRKVDPKT IWDGHQTSVE TTSKAAQAKV NVEEQIAQIH RAQGLLPDSS KERIGPKVTA
VEETTGARRS TEPTNIAVIS APPTSVAPPL LPPMVPVVAA PKPLYVLQQN PRAAAPPPPP
PPPPPPPAVA NPAYPPEPEP PVKRTKTFEE QLKPEEEWLN KFGDHGPINI TVVFPVSAEK
PEWNLNGQSV SYSLNLTDPV SAIKGKIQET TSMPSKYIYK GCQYACILQH ARWFYNSIAI
ERAMCLTFVM LKANAAPDEW QLVLINNRDE DFNRPTEKAH WDGHILCSTD LKAGTNGTWL
GISRRGRIGV LLNIMEPTCS AKGKFSRGNL VKDYLQSACD PLCYLQEVII PDAQKYSGFV
LLLLERHFLN SGFKWNLLTY SNQSNRGIES FFSGVYGYGN SVPDLPFLKV KRGLQRFENI
VLKSHSSNQD PEPVLADLLN LLKDSKENFP DDQLQSQGAH YETAVQKRLS RCFYDLLPHQ
EYGTRTHSII LIDGSGKALF VEENRCALED EEEEEANRTP PFADQSIFSN LVNYSEKSQK
KLFNLRRNFL HLVSYEMVIV IVNLQTTNVG VEQNSSCTDA TIHPHVLQGW HSAAGYQAPV
IAKAESFHHN HQHRSVQLHT GCYVQSSSSS SAVSISDQPN YCAGGGGGGG FHYAQSSLGE
LHQQQQQQRQ QTMSMLPSGA YGETSYDSCD ADASYAIEAP PKKRAGGRRP KEETLILTPE
EEEKRRLRRL RNKEAAARCR RRRLDHLNKL EMEVEQLLME QRRLKEESER LEERKMELEL
LLDEHLPVCR CTPQPGTFSS GDDRDALDSF SSDDSNLPSA TQNCSRVADS PANSNTSLME
RKIFLTRPNT LNVVTISKTD ESIKSELLLS STPILPMETP SKFFTFDPLS VPTGVTPLTH
RAVDTSAFAT ASSYLLNSSS LQELTTAPPT TTTTAPTPSS SSTTASSNNK ALVML
//
