ID A0A0V1I1J3_9BILA Unreviewed; 987 AA.
AC A0A0V1I1J3;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=RNA-binding protein 5 {ECO:0000313|EMBL:KRZ16673.1};
GN Name=RBM5 {ECO:0000313|EMBL:KRZ16673.1};
GN ORFNames=T11_253 {ECO:0000313|EMBL:KRZ16673.1};
OS Trichinella zimbabwensis.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268475 {ECO:0000313|EMBL:KRZ16673.1, ECO:0000313|Proteomes:UP000055024};
RN [1] {ECO:0000313|EMBL:KRZ16673.1, ECO:0000313|Proteomes:UP000055024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1029 {ECO:0000313|EMBL:KRZ16673.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ16673.1}.
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DR EMBL; JYDP01000010; KRZ16673.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1I1J3; -.
DR STRING; 268475.A0A0V1I1J3; -.
DR Proteomes; UP000055024; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16162; OCRE_RBM5_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR041591; OCRE.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR13948:SF3; FI21118P1; 1.
DR PANTHER; PTHR13948; RNA-BINDING PROTEIN; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF17780; OCRE; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00547; ZnF_RBZ; 1.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000055024};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 111..190
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 255..284
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 302..385
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 775..805
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 915..961
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 1..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..60
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..94
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 987 AA; 109646 MW; 9E4424327C810FE1 CRC64;
MSSDYRSKGY SGESSDRRLH AEHHNYDYGY ERRHRNHSSR YERSRNRSRS SSSDWSRSSR
HRSYRRSRSR EHRNYDDSDE GYSKRSPFCD EDRTYESNRP RYRYANIEPN STLVVKGIPL
SYNEELVRNA VVEMGVTPID VRILRKRESG ESRGFGFIEF MSIEEATKYM ERSQLGSQFG
KIVIATFSFL IYVVGCRYER SHSLIVMDTL DKELEFSFIP FLSGFLEVNG RRMAEVQYSI
NKNAYPSAAF VGSQRGGDWI CGKCTTNNFK KRDHCFKCGV RREDSDPVCG DGINEIGVMP
CDTLLFRNLP YSVDEVKLTD HLNRTCAMTI QQVLIARNVE NGFSRGYAYV QMTNVNDAAQ
LLTTLTAVSK LIIDGREILV SYSKIPLCTV LAETALTRGS SNLNPGNSNY FSSGGTADKA
DMLISQTDYT NAAAAVAQSA IKKAQVLRQA VTQVTSAALL ESGAEYKLQN TAVLLAGSLQ
NEIGGNSSKK VPSEESSVVV PQSSDVSLGT VDTAYGKLQR YPAPNVSQFQ YDQTSGYYYD
PTTGLYYDSN SQYFYNNTTQ QFLYWDSCCQ TYLPVVSSQG EDVGVGEEAS TAKDKKTAKP
KQEKVKVAKK IQKDMEKWAK ALNHRKETVS SATTSSSKIV AAPEAEATAV AVAAAAAAVA
SAAAAANLAI STSTVADVVA DDVVAQTSST ANAAFMMLER TVVACFISSI FLNTQLSIFC
SDGTIFADPE FQLDQVMMIH HSADVISDDE NPLKKSTSVE LMNLEKEPDV DWEKLVCLLC
RRQFPTKDIL EKHQRLSEMH KVNKQTNKQT TVDSLSSSSS SVCCLIDWFV IIKKKNSKEM
LCFNDQSSKL AEKQAKFCKS RQLSASSAGA TQYRDRASER RAKFGLDDQP HPNKLKEKFL
ESLECAAVAT PKPAVESIGS RLMRNMGWKE GQGLGKSNQG ITNPIESERR VQGAGLGAPG
SVYKANAGAS YKEHVKAALR QKFFENR
//
