ID A0A0V1KPB5_9BILA Unreviewed; 1036 AA.
AC A0A0V1KPB5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Lupus La-like protein A {ECO:0000313|EMBL:KRZ49055.1};
GN Name=ssb-a {ECO:0000313|EMBL:KRZ49055.1};
GN ORFNames=T02_9835 {ECO:0000313|EMBL:KRZ49055.1};
OS Trichinella nativa.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ49055.1, ECO:0000313|Proteomes:UP000054721};
RN [1] {ECO:0000313|EMBL:KRZ49055.1, ECO:0000313|Proteomes:UP000054721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS10 {ECO:0000313|EMBL:KRZ49055.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ49055.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDW01000340; KRZ49055.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1KPB5; -.
DR STRING; 6335.A0A0V1KPB5; -.
DR Proteomes; UP000054721; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd07323; LAM; 1.
DR CDD; cd12291; RRM1_La; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR006630; La_HTH.
DR InterPro; IPR014886; La_xRRM.
DR InterPro; IPR002344; Lupus_La.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR35842; SI:CH211-67E16.11; 1.
DR PANTHER; PTHR35842:SF1; SI:CH211-67E16.11; 1.
DR Pfam; PF05383; La; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF08777; RRM_3; 1.
DR PRINTS; PR00302; LUPUSLA.
DR SMART; SM00715; LA; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50961; HTH_LA; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS51939; XRRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000054721};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00332}.
FT DOMAIN 624..715
FT /note="HTH La-type RNA-binding"
FT /evidence="ECO:0000259|PROSITE:PS50961"
FT DOMAIN 726..809
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 837..961
FT /note="XRRM"
FT /evidence="ECO:0000259|PROSITE:PS51939"
FT REGION 574..618
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 810..834
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 936..1036
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 601..618
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 957..977
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 991..1012
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1036 AA; 117235 MW; 1287D923C3E75B29 CRC64;
MEIFIRRVMK MQLLLFTVAA IWYLGKTTAT PRPGRINASH QRHQIWAEKA LELMYNFNCS
SLPLLVDQCE QMRRQQSADV RVYVAEVTNR GEKLFATVSS SSSTLVAYSI TQHFDWTHDG
LLVLDPFPEA SYGHLLLIYF IDYTNAETCE QNFGHYISGH GDCLRAARKR SCRGRYPWRG
CSQEASFLCA MDILPTAFLI NGKSRESRNS QLVHCKEIAG FASCPDELTS IKMRHKQSRG
HWYHEELQVG QEWAFQMPAD KADSTPQAAA PCRLFEVCDR AVILHGGWSE LTTQEDDLYL
LHQTGNFLKH HGFMPTHTHY YHPYHVSAIP DDFSLKNANM LHDWSAIRGH IQSLCKSSNC
VDVLLVMIHG PAALHASPSL ILGDFNHDGS GNPGEWYSMH DLLDDLANCH ANQVHLILDH
SFSGQVIELL NKSTKHKNVI AVSSSDAEQF SVGSEFTKLW LRKNQLPDCF TDSFHLVKNF
VQNSSPQIFQ GSEADRGKTL AGAPCQSNSA YSEQELLEKY SGCQNVPTAL WFSKTKEKLT
MQKDRYLSPR TTFSILNSFV QLAMTDIMSN EMTSEVTEQE AEKANMSVSE DTADPAPANN
AVHDEKSEEN GLAGNQAKDE IKQELPIEIV KAKIRKQMEY YFCNDNLCTD KFLRAEMEKD
SGIPLETFMT FNRIKALTND VAVVVAALKE AESDFLEMTD DQLNIRRKLS FPVPDWDAFI
ASRAERTAVV KKFPLNVTLD KLEEFFHPLG KIESIRMIYK KDQSRSFTGT VFVIFSDVEE
MKSFLTREGL SYEECKLTLH QLTVKKKQDE AEATAKVEST ESTPVKNSRK RKENKVTRRK
GVVLHVDNIP SRVNRHQLHA LFSNYQPIEW IEFGRGDTKA KVRFQGDENA AQEVLTKIQS
ESDQFMLEEN PLGLRLLTDA EEDDYWSSVM QAIEGKKARA TDTDGGTKRR GRRKQNSKTN
DHQDHHIKEE EENKGNEIVV DVAAVADGQE NDSMEETNTS MEVNVTAEKN SMEIEESSVE
VEGAEVAAAE TDAMSA
//
