ID A0A0V1L7D8_9BILA Unreviewed; 419 AA.
AC A0A0V1L7D8;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 13-SEP-2023, entry version 21.
DE SubName: Full=CDK5RAP1-like protein {ECO:0000313|EMBL:KRZ55460.1};
GN Name=FucTC {ECO:0000313|EMBL:KRZ55460.1};
GN ORFNames=T02_7612 {ECO:0000313|EMBL:KRZ55460.1};
OS Trichinella nativa.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ55460.1, ECO:0000313|Proteomes:UP000054721};
RN [1] {ECO:0000313|EMBL:KRZ55460.1, ECO:0000313|Proteomes:UP000054721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS10 {ECO:0000313|EMBL:KRZ55460.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ55460.1}.
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DR EMBL; JYDW01000114; KRZ55460.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1L7D8; -.
DR Proteomes; UP000054721; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR InterPro; IPR030513; Dehydrin_CS.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR005839; Methylthiotransferase.
DR InterPro; IPR020612; Methylthiotransferase_CS.
DR InterPro; IPR007197; rSAM.
DR InterPro; IPR023404; rSAM_horseshoe.
DR InterPro; IPR002792; TRAM_dom.
DR NCBIfam; TIGR00089; MiaB/RimO family radical SAM methylthiotransferase; 1.
DR PANTHER; PTHR43020; CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1; 1.
DR PANTHER; PTHR43020:SF2; MITOCHONDRIAL TRNA METHYLTHIOTRANSFERASE CDK5RAP1; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR Pfam; PF01938; TRAM; 1.
DR SFLD; SFLDG01082; B12-binding_domain_containing; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS00823; DEHYDRIN_2; 1.
DR PROSITE; PS01278; MTTASE_RADICAL; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
DR PROSITE; PS50926; TRAM; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000054721};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691}.
FT DOMAIN 79..320
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
FT DOMAIN 322..403
FT /note="TRAM"
FT /evidence="ECO:0000259|PROSITE:PS50926"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ55460.1"
SQ SEQUENCE 419 AA; 47259 MW; 938AE668C3C35BED CRC64;
LMRKHVHFLS EKNYPQGCMA KRSAHPSGSE VGLVDLIAGP DAYRDLPRLI ASCETGQQAV
NTIFSYDETY ADIHPIRRDS SSQFAYLSIM RGCSNMCSYC VVPFTRGFEK SRPGVKEVTL
LGQNVNSYCD ADASSTIVDG QLYLANGFVN VVKRKKCGIR FAELLQRLSN INNNVRIRFT
SPHPKDFPDE VLDVIRNHPN ICNSVHLPAQ SGSNSVLQRM HRGYTVEAYM NLVEKIKDKI
PGVTLTSDFI SGFCGETDED HEQTVQLIKN VQYSYCYTFV YSMRERTKAH RRYCDDVPID
VKKARSQQLQ NEFRKGALIL NRKFIGKTLT VLVEKESKRS TEFWMGRSDG NLKVIFPKSS
VVNCFDSSSS SSSIHQRNIK IGDFVDVDIN DASSEVLKGV ARRIVLLLAS LCIVQMCSW
//
