GenomeNet

Database: UniProt
Entry: A0A0V1LGP5_9BILA
LinkDB: A0A0V1LGP5_9BILA
Original site: A0A0V1LGP5_9BILA 
ID   A0A0V1LGP5_9BILA        Unreviewed;      3236 AA.
AC   A0A0V1LGP5;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   05-JUN-2019, entry version 16.
DE   SubName: Full=Protein sidekick-like protein {ECO:0000313|EMBL:KRZ58685.1};
GN   Name=rig-4 {ECO:0000313|EMBL:KRZ58685.1};
GN   ORFNames=T02_10267 {ECO:0000313|EMBL:KRZ58685.1};
OS   Trichinella nativa.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ58685.1, ECO:0000313|Proteomes:UP000054721};
RN   [1] {ECO:0000313|EMBL:KRZ58685.1, ECO:0000313|Proteomes:UP000054721}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS10 {ECO:0000313|EMBL:KRZ58685.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KRZ58685.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; JYDW01000053; KRZ58685.1; -; Genomic_DNA.
DR   Proteomes; UP000054721; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   GO; GO:0000956; P:nuclear-transcribed mRNA catabolic process; IEA:InterPro.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   CDD; cd00063; FN3; 13.
DR   CDD; cd01729; LSm7; 1.
DR   Gene3D; 2.130.10.10; -; 2.
DR   Gene3D; 2.60.40.10; -; 18.
DR   InterPro; IPR003961; FN3_dom.
DR   InterPro; IPR036116; FN3_sf.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR013098; Ig_I-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR017132; Lsm7.
DR   InterPro; IPR001163; LSM_dom_euk/arc.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   InterPro; IPR007319; SSU_processome_Utp21.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR001680; WD40_repeat.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR017986; WD40_repeat_dom.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   Pfam; PF00041; fn3; 12.
DR   Pfam; PF07679; I-set; 1.
DR   Pfam; PF01423; LSM; 1.
DR   Pfam; PF04192; Utp21; 1.
DR   Pfam; PF00400; WD40; 1.
DR   SMART; SM00060; FN3; 13.
DR   SMART; SM00409; IG; 5.
DR   SMART; SM00408; IGc2; 5.
DR   SMART; SM00651; Sm; 1.
DR   SMART; SM00320; WD40; 10.
DR   SUPFAM; SSF48726; SSF48726; 6.
DR   SUPFAM; SSF49265; SSF49265; 7.
DR   SUPFAM; SSF50182; SSF50182; 1.
DR   SUPFAM; SSF50978; SSF50978; 1.
DR   PROSITE; PS50853; FN3; 13.
DR   PROSITE; PS50835; IG_LIKE; 5.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 2.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000054721};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054721};
KW   Repeat {ECO:0000256|SAAS:SAAS00923712};
KW   Ribonucleoprotein {ECO:0000256|SAAS:SAAS00679672};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT   TRANSMEM    126    145       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   2077   2100       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      160    243       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      364    437       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      444    535       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      541    623       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      624    707       Ig-like. {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      720    822       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN      827    924       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN      929   1028       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1029   1125       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1130   1225       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1230   1341       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1346   1443       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1447   1541       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1546   1643       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1648   1748       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1753   1848       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1851   1947       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     1948   2067       Fibronectin type-III.
FT                                {ECO:0000259|PROSITE:PS50853}.
FT   DOMAIN     2462   2907       WD_REPEATS_REGION. {ECO:0000259|PROSITE:
FT                                PS50294}.
FT   REPEAT     2571   2602       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REPEAT     2866   2907       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REGION     2976   3021       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A0V1LGP5}.
FT   COMPBIAS   2983   3000       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A0V1LGP5}.
SQ   SEQUENCE   3236 AA;  361310 MW;  3A4E870B55D8D273 CRC64;
     MQNREKKKKE TVINLSNYIE KALRVKFQGG REITGILKGY DQLLNLVLDN TTEYLPDRQD
     MSKIGTETRN LGLTIARGTT VLVICPVDGS EQISNPFVLH RWRSFHDDRQ RLSLVYRCHP
     AERKMTSFFS SFIVLIIIII CLDFVDGNLV NGSELLLLGP QLLSFEKRSL FVHEGAGFQL
     SCPVIEADQR LQIQWFKNRR LISPVAGVPV LNLRNASKFD AGSYFCKATD QNGGILSEST
     QIFVSYFNPP PAPGKLIEVR AKVGGYAIFK PPSIDAAPLY HLQWRWMFNN VLIAPSLRAF
     ISSRGALVLL DVEPNDFGQY SLEVYHDTLK SRPVKYDYWL EQDASGDLFE SNIFAGTVSI
     VWKPHNQVFV KSQWSDEVIF ECVPYHGSLE NLNIVWKFNQ EIIDEQNLNY QLRNFRRQLV
     VRNPTEDQAG LYTCEASFSL FKAPRLLNSL PNVTYASFGS DVDIHCSFDG EHNITWFYNG
     DDLTEPLQCC AKTIGLEKLS SDVLRVKKLS RDQIGMYQCL AENNHGSAID GTYVQGRTNA
     PHIEQLSNVT ASVGQDVTLS CDALGWPKPT VQWYFNGIEV NGTNTGSGLL LLPKVEIKDA
     GWYTCVASNQ FGVTDGRLYL NVQGKVKILK GPEDEAVVIG SSVVFPCQVT AEGTFTRQWF
     LKDQLLIPGA VRNVNFLPDG ALSIQEVAPI NIGIYKCVVR SASGTVSQSG SLKIMEKPSM
     PLHVKAYVNN ETLPAYVTLT WSQGFDGNSP IIKYVVEQRM VGSQGALSEW EVAVDNIVKE
     QHEIKIDNLK PSSVYDFRVI AVNRYGYGMP SVPSNRVSMP QQPPAAAPQN VAGSARSASD
     IMIQWQPPPA DQWNGDILGY IVRYRLANYP DIPWNYHNIS DSRTRNWLIT DLITWREYEI
     QAAAFNERGM GVFSKSLYIT TLEGVPTDAP LLTNVTVINS TAVFIKFNPP SQQMIPGVNL
     GYKVEAWLGE VGTELAKSIK VLPYSLHAVE ATMSGLEKYA TYNITALCFT APGDGPRSSP
     VQVTTDQDVP ESVCDAKAEE IQFNFAEITW KPPKHPNGIL LNYTLVYWSL NDTSLNETVQ
     LSADILRYKV QGLKPVTAYE VQIYASTAIG DGPRSKLVFQ TTVPPEMPGP PSRLAISNPR
     QRDVTLQFTP GYDGKTLISR WIVEAMVGSS STWQEVYNVS DPHAKSLTVS GLRPFTNYTL
     RLLAENVVGR SPASVPSNRF TTLQAVPEFA PVDFDVQPIS STSVRATWNP LPKHAWNGPP
     LGYLLFYTRN DTATATGGGG GNLFGDSEFH TKEIVVKNPK SSEYVLKKLC KHCTYVFRLA
     AFNMIGRSEL SRSLVIKTYE DTPSGAPQAV RATPESPKSV VVTWQKIPEN QQNGHILGYR
     VEYRSISSPT DIGHEVVNDE SRLAVTLDGL RPYTDYRIKV AGITMVGIGV YSEPDLIIRT
     AEDVSEPPSE MFFPYVTTNE VRLTWKPPYR PNGIVQRYEV SYWQNMTGEH DGVKTMLASD
     LRMFVATGLF PMTLYTFSVA AVNSMGLGQR ALATVYTSQD RSLPQSPTKP ELALSKVQRS
     DAISIEWQNT ANNARMPVRF YELEIQHENG DSWMEWDEKV AAERATVDKL KPNAAYRFRV
     RSVNDHGRSP WSVVSDWMRT LEAPPTEPPR EIEVFAFNAS SVQVRWKAPE RSTWNADVVG
     YRILYKSYGE NNTFRVKEFP MHDAYKREWD FLLSNLKRFR HYVVQLQTFN QIGSSVTSKP
     HFVYVAYSIP ETAVTGLRAE PISSTEANVS WDPWPADASP INGFKVYYSR ETSENGTASE
     QDVVEPEASF KVLSGLSKFS SYKIDVVPFN RAGEGPKMQV TLRTLPDRPG PVQSLRFHDV
     LLDSVNISWT PPSEPNGVII GYRVTYKTYK LDKEFMSQRQ EKVIGRQYLV VTNLEENVTV
     SFSVEAETVV GYGPKVNGTV TIGPQPGSPE PPTTPIIIPS DSSLLIEWQS GEENLQSAPV
     DSFIVQYRGQ NGAMPIRRRR AELLATESLL TKRWQTLAII DSSVNTYTVS YRQLKPGSTY
     TFRVVSRNKY GVSYPSAPSD PFTVPEGFSD KPFYLEWWFL VILALVLLVI VVIVVAVLWV
     TGNGKKCDHG RSGSDTSLQL SDGGIVTYQL RASKRNGSKV RKVPFGSGSH NNNSRYTRYP
     TLANDEITFT KGSDVLGLKK RETAEEKSAY YNWYASVNNL DESHTSAKPT YTSAALLVDE
     PNMDPDVDSI AQHYQTTDSC YRETWRRAKN AAVHRPLSAS GEEDDAYVIR EEQLLSLDRN
     ASLNRVPPTA FGFVICWAMM TGEESLLFAS YRALGVVCNS DVPAVVRFLP QSKTVLLYTS
     VGRAVHTYRC SNMSLMAISQ SLPSEVCSLA VGDPCERVYA GTMCGRVFIL RFGRHIEREM
     HHHKAAVRHL LALGSHLISV DEQNHIVVSE VDSGEVFSTV PFDEKTFRVS AVCHPATYLN
     KLVFGSEQGT LRLFNVKTSR VVYEFQGWHS AVVIMQQSPV IHVVAIGLAN GRILVHNMKT
     DQTLLTFQHN DGPVSALAFR LDGQQALVSA SVTGSLIVWN LDAARLAAVR KFAHHGPINT
     LIAIPDEPIM ITVGNDNAIK TWIFDGGAFV TPRQMNVREG HSKPPNYIRF HGSDGSELLS
     ASADGTLKMF NTVTEQRNVN LGFASLVRRR VANRRGSDFN KLRLPPIVHF SSQAAREFEW
     DDVVCCHEKF STVTTWSTRR GRLGSHKLQD KRLKKMPLAS ATCCVISPCG NTALVGYSTG
     DVNIYNIQSG AERGSLVDSS GKAAHSFPLQ GICVDAFNQI IVTGCTGGHL KMWNFRTRQC
     LHDETLDSGI CQLVLNSDNN LIGIALDNLS LHLYDIYNRR TVRRFEKCHG NRITDLGFGP
     GGQWLISSSL DCTIKVWDLA SACLVDVLTF DDACRSFSIS PNGQYMATAH CEQRGIYLWL
     NKTYYRPGIA LRPLPLDYEP ATVFQLPGAA ACIDEEGTEV VEEQSTQQEL TEQGGEQQQE
     KENSPTEDSE DLQNQHHTGY SGRCSRDSLC AFSGLSESRW ANLPDLDMIR QRNKPKQQLL
     KAGKAPFFLK SIPGLVPSFD VEEEEQVQRS RLLKSPIATS ASNREASTFA DLLLAADDDA
     AYFTAFHHLQ SCNVSSVYTE LVNLGPESGA GSERLLRAFM RMAIAVLKTG RCFELINAQL
     SLFLQLHHQY LWTKGDEQLK RLLRELLDAQ QARWTRLDNL FSEVVCMLDF VKASLI
//
DBGET integrated database retrieval system