ID A0A0V1LJQ2_9BILA Unreviewed; 690 AA.
AC A0A0V1LJQ2;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE RecName: Full=PAT complex subunit CCDC47 {ECO:0000256|ARBA:ARBA00034875};
DE AltName: Full=Coiled-coil domain-containing protein 47 {ECO:0000256|ARBA:ARBA00034902};
GN Name=MED8 {ECO:0000313|EMBL:KRZ59410.1};
GN ORFNames=T02_12724 {ECO:0000313|EMBL:KRZ59410.1};
OS Trichinella nativa.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ59410.1, ECO:0000313|Proteomes:UP000054721};
RN [1] {ECO:0000313|EMBL:KRZ59410.1, ECO:0000313|Proteomes:UP000054721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS10 {ECO:0000313|EMBL:KRZ59410.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Rough endoplasmic reticulum membrane
CC {ECO:0000256|ARBA:ARBA00034697}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00034697}.
CC -!- SIMILARITY: Belongs to the CCDC47 family.
CC {ECO:0000256|ARBA:ARBA00034746}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ59410.1}.
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DR EMBL; JYDW01000042; KRZ59410.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1LJQ2; -.
DR Proteomes; UP000054721; Unassembled WGS sequence.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0030867; C:rough endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0032469; P:endoplasmic reticulum calcium ion homeostasis; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR012879; CCDC47.
DR InterPro; IPR019364; Mediatior_Med8_fun/met.
DR PANTHER; PTHR12883; ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED; 1.
DR PANTHER; PTHR12883:SF0; PAT COMPLEX SUBUNIT CCDC47; 1.
DR Pfam; PF07946; CCDC47; 1.
DR Pfam; PF10232; Med8; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000054721};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT REGION 247..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 614..690
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 636..677
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 690 AA; 79174 MW; 9043DD1F24488973 CRC64;
MLQLLRSDRA SHFKNYVFLP IKLSVEVDAD LEAATENRLH AWTHAVVPDY LRTKPDPQVE
QKDQQISNQV QQRICNPESL QKQITAFNRC LNCILDSLNA SIRDSEMDGR KTSKTSDGED
TALLVAAILK GQNVKPAYSA TPASSRGSSG DSGHSKASKA QQVQCCFILK KQCMAKNKCS
ININQFTTER EEKVRRKTCI WMFFLSCLFE FVELSVKQVS QIDDNEFAEF EEFDVELDAS
VDADFTANNV NERETPPVDT ASIGAKRSPA YAEQKRNDAP NSNFNDDDYG IVEDESVDDF
SHLLDENEFE NFPDERRPGK QNAGPSKTVT QLKITDVPGH LRNNWNNFVV ELFLIFGLIV
YVINYIYGKT KNHSLAVAWF DSNRPFLEEN FSIVGDDGIS PEVTKNVLIK ESDNHYIVWC
SGRQGCIGME IHLKLIKRQD LLSLIFYIIR PKFDVIEIKI ILNPEEMDPF VFALGTKRSA
IKNSKEIMDL NLYCSEKKNV EKLGLPSSYI LHSEIGEVTT GLIDTKIVSA LCKYKDVVDY
IHISDQFVGI KPIEMENMTK PPETAKCLTK CEYLVPGQLR ATEEDVSSLQ PLMIFIFHVL
EKVRRFRLTR EGKQKADKNR QYVEESFLKT THAQRQEAAQ QRREERARER KERLMAEEDP
ERQRKLEKQE LKRELKKKQP RVKQIKIKAM
//