ID A0A0V1M9U1_9BILA Unreviewed; 646 AA.
AC A0A0V1M9U1;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 22.
DE SubName: Full=Intermediate filament protein ifa-1 {ECO:0000313|EMBL:KRZ68635.1};
DE Flags: Fragment;
GN Name=ifa-1 {ECO:0000313|EMBL:KRZ68635.1};
GN ORFNames=T10_1850 {ECO:0000313|EMBL:KRZ68635.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ68635.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ68635.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ68635.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ68635.1}.
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DR EMBL; JYDO01000159; KRZ68635.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1M9U1; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 2.60.40.1260; Lamin Tail domain; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 2.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR016451; Intermed_filament_ifa/ifb.
DR InterPro; IPR001322; Lamin_tail_dom.
DR InterPro; IPR036415; Lamin_tail_dom_sf.
DR PANTHER; PTHR45721:SF12; INTERMEDIATE FILAMENT PROTEIN IFA-1; 1.
DR PANTHER; PTHR45721; LAMIN DM0-RELATED; 1.
DR Pfam; PF00038; Filament; 2.
DR PIRSF; PIRSF005546; Intermed_filamnt_Ifb-2; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR SUPFAM; SSF74853; Lamin A/C globular tail domain; 1.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
DR PROSITE; PS51841; LTD; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843}.
FT DOMAIN 143..496
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT DOMAIN 529..638
FT /note="LTD"
FT /evidence="ECO:0000259|PROSITE:PS51841"
FT REGION 1..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 133..315
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 401..495
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 9..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..96
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ68635.1"
SQ SEQUENCE 646 AA; 73394 MW; C0B45B6414561929 CRC64;
LLDSSFDVMP ELKTTTKIEK QNITTSNSSS TSSTSNSQSG GGLRTTTTSS SSKVEEQHTE
QNFPTLSNKM DSGEYRSTIS ARPGFARNSP GTPTIGGTPT GVGAGGRVLK IVTEMGSSSV
SGFSPGFHQA GAASAILESR EREKKEMQDL NDRLASYIEK VRFLEAQNRK LANDLEGLRG
RWGKDTSSVK QMYEGELAEA RKLIDDTAKN KATLESQINR LQTDLAEFRR KYEDALRQRA
GDQEKIDGLL TQLSEHEAEA NLLRRRIEGL EDEVNRVKKE NMRLQSELNK ARTDLDQETL
NRIDYQNQVQ TLLEEIDFIR RVHDQEIKEL QALAARDTTA ENREFFKNEL ALAIRDIRNE
YDSVSLQNKS DMESWYKLKV QEIQTASARH TMETGYQKEE VKRLRTQMGD LRGKLGDLES
RNSLLEKQVQ ELTYQLEDDQ RQYESALNDR DGQIRKMREE CQALMVELQM LLDTKQTLDA
EIAIYRKMLE GEENRTGLRQ LVEQVVKTRS LQQQEDTESM RVVKGEMATR TSYQRSAKGN
VSISECNPEG KYIDEPLDEW KLKRKIDGKR EVVFTFPAKF VLKAGKNVKV WARNQGGVND
PPNQIIFEGE DNWGVGQNVQ TILYNKDGEE KATHIQRSSQ QTTSTA
//
