ID A0A0V1MLB6_9BILA Unreviewed; 816 AA.
AC A0A0V1MLB6;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 27.
DE SubName: Full=Transcription initiation factor TFIID subunit 4 {ECO:0000313|EMBL:KRZ72657.1};
GN Name=Taf4 {ECO:0000313|EMBL:KRZ72657.1};
GN ORFNames=T10_8191 {ECO:0000313|EMBL:KRZ72657.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ72657.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ72657.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ72657.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ72657.1}.
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DR EMBL; JYDO01000075; KRZ72657.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1MLB6; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR InterPro; IPR003894; TAFH_NHR1.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR PANTHER; PTHR15138:SF14; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF05236; TAF4; 1.
DR Pfam; PF07531; TAFH; 1.
DR SMART; SM00549; TAFH; 1.
DR SUPFAM; SSF158553; TAFH domain-like; 1.
DR PROSITE; PS51119; TAFH; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:KRZ72657.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:KRZ72657.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 354..459
FT /note="TAFH"
FT /evidence="ECO:0000259|PROSITE:PS51119"
FT REGION 94..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 124..146
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 341..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 476..495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 589..631
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 650..683
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 95..111
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 124..140
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 650..671
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 816 AA; 88057 MW; 9E4C5659AE9C0BE5 CRC64;
MGDVGGLEKL LNSEVDEAAL KQISGTLKSE LISPQKSQVG MPSNLSSINT NFVYQNGPAN
QALWKPNITV SSELPSVINS VSLKDAVNNI NGGRGERSPL IQQSHSRTVS PGPARSYFRI
VSNVDGNTNG SQSSENMASS RRRLENADVK PIIQATLQST SRSGNATEQN SPAMCSLNRT
SQSPLSFMRT TNLMPGNLQQ PRFNGAAQVT SLEKSLTTPA TIAVCGVDLR QRTPLLQNST
LQTQSISQGI STAQTGIAPK TAATILRTTT GQLVLVTGGA SLPVQVKSEL PIQTIVVSSS
QPKQTSSVTV QQHSSTIVHT SYMQQRQPVS TSSNLAAGYH HVSQNQSAPA PTPAGNSTPI
SLDQGEKKCM SFLKTLIRLA KDKGNPSVIN EVNRLVRDLL MSKISPPAFT SRIPAVLNSK
PQANLLPFLE SVLPSVQREF SAGNLVIEGL NDTEIHPTNA SNCAHPSPKT SPNFFSTPSR
SVSISSTSQP TQQHQQQHLV CPTVSTNSGT ASANISGPYI VATPVNVRPM AGNMGLHQGG
VQVHQQYPSV AHQLSSCQPT SVEMPFRPAP LPTQPSFVSE MINTQDKSTA VATAANSRTS
PAINGSSSIT LSSQPLLPAT PQQQQHQQQQ QQQQQQQQQQ QQQQQQQQQP QILLQQQQPS
TDSGKSLSVS TVTEKEPDDD INDVAAMGGV NLAEESQKIL ASTADLFNTD MQSCGPEPTF
LDLSSLQERM QASCSGVNVE SFQPDCCQLL SIACETRLRG LLEKMCAAAE HRTENLRVGY
LSRIMNFVFD FTFFIKIYFH FRRIHFIIKY LMSGVS
//
