ID A0A101N6M2_9ACTN Unreviewed; 597 AA.
AC A0A101N6M2;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KUM87552.1};
GN ORFNames=AQI88_40740 {ECO:0000313|EMBL:KUM87552.1};
OS Streptomyces cellostaticus.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=67285 {ECO:0000313|EMBL:KUM87552.1, ECO:0000313|Proteomes:UP000054241};
RN [1] {ECO:0000313|EMBL:KUM87552.1, ECO:0000313|Proteomes:UP000054241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 40189 {ECO:0000313|EMBL:KUM87552.1,
RC ECO:0000313|Proteomes:UP000054241};
RA Ruckert C., Winkler A., Kalinowski J., Kampfer P., Glaeser S.;
RT "Draft genome sequence of Streptomyces cellostaticus DSM 40189, type strain
RT for the species Streptomyces cellostaticus.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KUM87552.1}.
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DR EMBL; LMWL01000102; KUM87552.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A101N6M2; -.
DR STRING; 67285.AQI88_40740; -.
DR OrthoDB; 4990598at2; -.
DR Proteomes; UP000054241; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 2.60.120.1060; NPCBM/NEW2 domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR013222; Glyco_hyd_98_carb-bd.
DR InterPro; IPR038637; NPCBM_sf.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF58; BLL3014 PROTEIN; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF08305; NPCBM; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR PRINTS; PR01217; PRICHEXTENSN.
DR SMART; SM00776; NPCBM; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000054241};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 451..596
FT /note="Glycosyl hydrolase family 98 putative carbohydrate-
FT binding module"
FT /evidence="ECO:0000259|SMART:SM00776"
FT REGION 361..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..454
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 597 AA; 62378 MW; 4A5303093C41B9DE CRC64;
MPAQRGGSVL PPRKTAPADG ELIERMRAGD DSAYEELYRR HADAVRRYAR TCCRDGHTAD
DLTAEVFARM LQAVRGGSGP EYAVRAYLLT SVRRVAAHWT KSARREQLVD DFAVFAQQSS
HASEASDDTA SMGSFGTGLD LGADVRALHE AEQSMAMQAF RSLPERWQAV LWHTEVEDES
PSEVAVLFGL DANGTRVLAS RAREGLKQAY LQAHVSASLA GDEECARYAD QLGTYARRKL
RIRAERGLRK HLDECAKCRL AAAQIEEVAS GIPAMVPVAV VGWFGAAGYA KALGIVAGGA
GVGAAGAAAS AGGSSSGAGA GGAAASEGLA APVKAGIAAG VVAVAATAVV LALVNDNHPA
KEVAEPSPSA PLVRPKSPSP APPLKKKPAA RPVALAPEPP PTPSPAPTPT PTPTPAAEPS
PQPTPPPTPS PTPTPTPKPT PTPPPTPAPP PAPVVYEWSD LRYDVGGDGT RPEMRLGESS
WVWQRYGMSI GGKQYAPGVT VHGESSVTVD LNRRCTAYDA LAGVDDLTLG LGKVSFSVYA
DGVRLWRSGT VEGGGAAVAV HVDLTGRKTV RLVVEPHSEV LDQVTLADWA ESRFTCR
//