ID   A0A103XGD0_CYNCS        Unreviewed;       457 AA.
AC   A0A103XGD0;
DT   13-APR-2016, integrated into UniProtKB/TrEMBL.
DT   13-APR-2016, sequence version 1.
DT   27-MAR-2024, entry version 33.
DE   SubName: Full=TFIIEalpha/SarR/Rpc3 HTH domain-containing protein {ECO:0000313|EMBL:KVH90229.1};
GN   ORFNames=Ccrd_007823 {ECO:0000313|EMBL:KVH90229.1};
OS   Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae;
OC   Carduinae; Cynara.
OX   NCBI_TaxID=59895 {ECO:0000313|EMBL:KVH90229.1, ECO:0000313|Proteomes:UP000243975};
RN   [1] {ECO:0000313|EMBL:KVH90229.1, ECO:0000313|Proteomes:UP000243975}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=2C {ECO:0000313|EMBL:KVH90229.1};
RX   PubMed=26786968; DOI=10.1038/srep19427;
RA   Scaglione D., Reyes-Chin-Wo S., Acquadro A., Froenicke L., Portis E.,
RA   Beitel C., Tirone M., Mauro R., Lo Monaco A., Mauromicale G., Faccioli P.,
RA   Cattivelli L., Rieseberg L., Michelmore R., Lanteri S.;
RT   "The genome sequence of the outbreeding globe artichoke constructed de novo
RT   incorporating a phase-aware low-pass sequencing strategy of F1 progeny.";
RL   Sci. Rep. 6:19427-19427(2016).
CC   -!- SIMILARITY: Belongs to the TFIIE alpha subunit family.
CC       {ECO:0000256|ARBA:ARBA00008947}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KVH90229.1}.
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DR   EMBL; LEKV01005114; KVH90229.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A103XGD0; -.
DR   STRING; 59895.A0A103XGD0; -.
DR   EnsemblPlants; KVH90229; KVH90229; Ccrd_007823.
DR   Gramene; KVH90229; KVH90229; Ccrd_007823.
DR   OMA; DAIKWKV; -.
DR   Proteomes; UP000243975; Unassembled WGS sequence.
DR   GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR039997; TFE.
DR   InterPro; IPR017919; TFIIE/TFIIEa_HTH.
DR   InterPro; IPR002853; TFIIE_asu.
DR   InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR13097:SF7; GENERAL TRANSCRIPTION FACTOR IIE, POLYPEPTIDE 1, ALPHA; 1.
DR   PANTHER; PTHR13097; TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT; 1.
DR   Pfam; PF02002; TFIIE_alpha; 1.
DR   SMART; SM00531; TFIIE; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR   PROSITE; PS51344; HTH_TFE_IIE; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000243975};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          6..137
FT                   /note="HTH TFE/IIEalpha-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51344"
FT   REGION          313..343
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          385..457
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        313..329
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        440..457
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   457 AA;  51858 MW;  E56EE8D5B74AABE8 CRC64;
     MSIEPFNKLV KLTARAFYDD ITAKGDNQPK TGRSDNRGIA VVVLDALTRR QWVREEDLAK
     DLKLHLKQLR RTLRFFEEEK LVTRDHRKET AKGAKAYSAA VAATADNLTG RDGEEKIKLH
     THSYCCLDYA QIHDVVRYRL HRMKKKLKDE LDNKNTVQEY VCPKCGKRYN ALDAIRLISF
     EDDSFHCESC NTELVAESDK LASQDIGDGD DNARRRRREK LRDMLQKMEV ELKPLMDQLS
     RVKDLDAPDY GTLQAWELRA SAAARASNAD PGEIHVEVAF SGVEEKGEIK SESAPMKVLP
     PWMIKEGMNL TNEQRGGVKQ ESNMEGTSAS IDMKDEKKLS SQEDDAKNLQ ASFNNQIASL
     FFTTYIILSS YYAALLQRQK EQEEATKREQ DLSMNSVSTD VDPSNSRKRQ RDDDGEGDVE
     WEETPTAGET FKVDLNVEAA EPSGDDEDDD GIDWEEG
//