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Database: UniProt
Entry: A0A109ZY62_9BRAD
LinkDB: A0A109ZY62_9BRAD
Original site: A0A109ZY62_9BRAD 
ID   A0A109ZY62_9BRAD        Unreviewed;       246 AA.
AC   A0A109ZY62;
DT   13-APR-2016, integrated into UniProtKB/TrEMBL.
DT   13-APR-2016, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=GntR family transcriptional regulator {ECO:0000313|EMBL:KZD25440.1};
DE   SubName: Full=Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:AMH39452.1};
GN   Name=ydfH_2 {ECO:0000313|EMBL:AMH39452.1};
GN   ORFNames=A4A58_03160 {ECO:0000313|EMBL:KZD25440.1}, PROKKA_00640
GN   {ECO:0000313|EMBL:AMH39452.1};
OS   Tardiphaga robiniae.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Tardiphaga.
OX   NCBI_TaxID=943830 {ECO:0000313|EMBL:AMH39452.1};
RN   [1] {ECO:0000313|EMBL:AMH39452.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Vaf-07 {ECO:0000313|EMBL:AMH39452.1};
RA   Kopat V.;
RT   "Evolution marks in rhizobial microsymbionts genomes from the relict
RT   species Vavilovia formosa (Stev.) Fed.";
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KZD25440.1, ECO:0000313|Proteomes:UP000076574}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Vaf07 {ECO:0000313|EMBL:KZD25440.1,
RC   ECO:0000313|Proteomes:UP000076574};
RA   Kopat V., Chirak E., Kimeklis A., Andronov E.;
RT   "Microsymbionts genomes from the relict species Vavilovia formosa (Stev.)
RT   Fed.";
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KT955714; AMH39452.1; -; Genomic_DNA.
DR   EMBL; LVYV01000001; KZD25440.1; -; Genomic_DNA.
DR   RefSeq; WP_068729699.1; NZ_LVYV01000001.1.
DR   AlphaFoldDB; A0A109ZY62; -.
DR   STRING; 943830.A4A58_03160; -.
DR   OrthoDB; 9789310at2; -.
DR   Proteomes; UP000076574; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR011711; GntR_C.
DR   InterPro; IPR008920; TF_FadR/GntR_C.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR43537:SF46; GNTR FAMILY REGULATORY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR   Pfam; PF07729; FCD; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00895; FCD; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000076574};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          36..103
FT                   /note="HTH gntR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50949"
FT   REGION          1..32
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   246 AA;  27230 MW;  4D524F739934E892 CRC64;
     MSFDDMLIQP GKPRRKAGIT GPVSRVDRAG ATTGKLTRAE ELRLQLADEI VRGVLAPGTS
     LDETDLAQRF NVSRTPVREA LRQLTASGLV DSRAHRGAVV AQPSIDRLTG MFEAMAELEA
     ICAGLAAERM PAVQRHGLEA IHEELRVLSY DGNPDRFHEV NERFHNAIYA GSQNEYIAEI
     TLATRVRVQP FRRAQFRNLG RLAKSQAEHD RVVVAIMRGD RNGAAAAMRA HIELVRGEYE
     HYAVSL
//
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