ID A0A120A451_BACSE Unreviewed; 521 AA.
AC A0A120A451;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Cytochrome bd-I ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:KWR57851.1};
DE EC=1.10.3.10 {ECO:0000313|EMBL:KWR57851.1};
DE SubName: Full=Cytochrome ubiquinol oxidase subunit I {ECO:0000313|EMBL:KAB5316483.1};
GN Name=cydA {ECO:0000313|EMBL:KWR57851.1};
GN ORFNames=AA415_00395 {ECO:0000313|EMBL:KWR57851.1}, DW668_09410
GN {ECO:0000313|EMBL:RHF75584.1}, DW853_05110
GN {ECO:0000313|EMBL:RHC32035.1}, DWV41_14965
GN {ECO:0000313|EMBL:RGW94109.1}, DWV77_11520
GN {ECO:0000313|EMBL:RGW33175.1}, DWY58_03365
GN {ECO:0000313|EMBL:RGR29080.1}, DXC34_07550
GN {ECO:0000313|EMBL:RGM13652.1}, F9958_01560
GN {ECO:0000313|EMBL:KAB5316483.1};
OS Bacteroides stercoris.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=46506 {ECO:0000313|EMBL:KWR57851.1, ECO:0000313|Proteomes:UP000056419};
RN [1] {ECO:0000313|EMBL:KWR57851.1, ECO:0000313|Proteomes:UP000056419}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CL09T03C01 {ECO:0000313|EMBL:KWR57851.1,
RC ECO:0000313|Proteomes:UP000056419};
RX PubMed=26768901; DOI=10.1186/s12864-016-2377-z;
RA Coyne M.J., Roelofs K.G., Comstock L.E.;
RT "Type VI secretion systems of human gut Bacteroidales segregate into three
RT genetic architectures, two of which are contained on mobile genetic
RT elements.";
RL BMC Genomics 17:58-58(2016).
RN [2] {ECO:0000313|EMBL:KWR57851.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CL09T03C01 {ECO:0000313|EMBL:KWR57851.1};
RA McClelland M., Jain A., Saraogi P., Mendelson R., Westerman R.,
RA SanMiguel P., Csonka L.;
RL Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000261223, ECO:0000313|Proteomes:UP000283762}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF05-4 {ECO:0000313|EMBL:RGW94109.1,
RC ECO:0000313|Proteomes:UP000284777}, AF12-7
RC {ECO:0000313|EMBL:RGW33175.1, ECO:0000313|Proteomes:UP000285150},
RC AF25-6 {ECO:0000313|EMBL:RGR29080.1,
RC ECO:0000313|Proteomes:UP000284161}, AM25-16
RC {ECO:0000313|EMBL:RHF75584.1, ECO:0000313|Proteomes:UP000283762},
RC AM36-9BH {ECO:0000313|EMBL:RHC32035.1,
RC ECO:0000313|Proteomes:UP000285305}, and TF03-6
RC {ECO:0000313|EMBL:RGM13652.1, ECO:0000313|Proteomes:UP000261223};
RA Zou Y., Xue W., Luo G.;
RT "A genome reference for cultivated species of the human gut microbiota.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:KAB5316483.1, ECO:0000313|Proteomes:UP000467334}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BIOML-A6 {ECO:0000313|EMBL:KAB5316483.1,
RC ECO:0000313|Proteomes:UP000467334};
RX PubMed=31477907; DOI=.1038/s41591-019-0559-3;
RA Poyet M., Groussin M., Gibbons S.M., Avila-Pacheco J., Jiang X.,
RA Kearney S.M., Perrotta A.R., Berdy B., Zhao S., Lieberman T.D.,
RA Swanson P.K., Smith M., Roesemann S., Alexander J.E., Rich S.A., Livny J.,
RA Vlamakis H., Clish C., Bullock K., Deik A., Scott J., Pierce K.A.,
RA Xavier R.J., Alm E.J.;
RT "A library of human gut bacterial isolates paired with longitudinal
RT multiomics data enables mechanistic microbiome research.";
RL Nat. Med. 25:1442-1452(2019).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the cytochrome ubiquinol oxidase subunit 1
CC family. {ECO:0000256|ARBA:ARBA00009819, ECO:0000256|PIRNR:PIRNR006446}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KWR57851.1}.
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DR EMBL; WCLE01000002; KAB5316483.1; -; Genomic_DNA.
DR EMBL; LRGC01000001; KWR57851.1; -; Genomic_DNA.
DR EMBL; QSSV01000008; RGM13652.1; -; Genomic_DNA.
DR EMBL; QRUB01000002; RGR29080.1; -; Genomic_DNA.
DR EMBL; QSAF01000013; RGW33175.1; -; Genomic_DNA.
DR EMBL; QSBD01000031; RGW94109.1; -; Genomic_DNA.
DR EMBL; QSHQ01000007; RHC32035.1; -; Genomic_DNA.
DR EMBL; QRHJ01000022; RHF75584.1; -; Genomic_DNA.
DR RefSeq; WP_005651823.1; NZ_WCLN01000022.1.
DR AlphaFoldDB; A0A120A451; -.
DR STRING; 46506.AA415_00395; -.
DR GeneID; 31795728; -.
DR PATRIC; fig|46506.5.peg.425; -.
DR Proteomes; UP000056419; Unassembled WGS sequence.
DR Proteomes; UP000261223; Unassembled WGS sequence.
DR Proteomes; UP000283762; Unassembled WGS sequence.
DR Proteomes; UP000284161; Unassembled WGS sequence.
DR Proteomes; UP000284777; Unassembled WGS sequence.
DR Proteomes; UP000285150; Unassembled WGS sequence.
DR Proteomes; UP000285305; Unassembled WGS sequence.
DR Proteomes; UP000467334; Unassembled WGS sequence.
DR GO; GO:0070069; C:cytochrome complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-UniRule.
DR GO; GO:0009055; F:electron transfer activity; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0019646; P:aerobic electron transport chain; IEA:InterPro.
DR InterPro; IPR002585; Cyt-d_ubiquinol_oxidase_su_1.
DR PANTHER; PTHR30365:SF0; CYTOCHROME BD-I UBIQUINOL OXIDASE SUBUNIT 1; 1.
DR PANTHER; PTHR30365; CYTOCHROME D UBIQUINOL OXIDASE; 1.
DR Pfam; PF01654; Cyt_bd_oxida_I; 1.
DR PIRSF; PIRSF006446; Cyt_quinol_oxidase_1; 2.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475,
KW ECO:0000256|PIRNR:PIRNR006446};
KW Electron transport {ECO:0000256|ARBA:ARBA00022982,
KW ECO:0000256|PIRNR:PIRNR006446};
KW Heme {ECO:0000256|ARBA:ARBA00022617, ECO:0000256|PIRNR:PIRNR006446};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRNR:PIRNR006446};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|PIRNR:PIRNR006446};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|PIRNR:PIRNR006446};
KW Oxidoreductase {ECO:0000313|EMBL:KWR57851.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000056419};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|PIRNR:PIRNR006446};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|PIRNR:PIRNR006446};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR006446}.
FT TRANSMEM 22..47
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 59..78
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 98..123
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 135..156
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 189..213
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 220..241
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 400..424
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 436..456
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT TRANSMEM 487..506
FT /note="Helical"
FT /evidence="ECO:0000256|PIRNR:PIRNR006446"
SQ SEQUENCE 521 AA; 57892 MW; CCB269A0D4B411A3 CRC64;
MLENIDTSLI DWSRAQFALT AIYHWIFVPL TLGLAVIMGI METVYYRTGD KFWKHTAKFW
MKLFGINFAI GVATGLILEF EFGTNWSNYS WFVGDIFGAP LAIEGILAFF MEATFIAVMF
FGWDKVSKRF HLASTWLTGL GATISAWWIL VANAWMQNPV GMEFNPDTAR NEMVDFWAVA
TSPMAVNKFF HSVLSGWVLA AVFVVGVSCW YLWKNREKKF ALASIKIAAW VGLCAAVLSA
WTGDGSGYQV AQKQPMKLAA MEGYYQGQEG AGLVAFGILN PDKKTADDGK DAFLFRMEIP
KFLSLLAERD SKAFVPGIND LLKGGYPLKD GTTALSAQEK IEKGKTAIGA FSAYRAAKAA
GNDAEAQVAA KVLKENVAYF GYGYIKDVNE LVPNVPLTFY MFRVMVILGG YFILFFIVVL
VLAYKKDLSQ MRWMHWVAML TIPLGYLAGQ AGWVVAECGR QPWAIQDMLP TSAAISKLDV
GSVQTTFFIF LVLFTVMLIA EVGIMLKAIR KGPEKELSHQ S
//
