ID A0A124SDP1_CYNCS Unreviewed; 653 AA.
AC A0A124SDP1;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Zinc finger, CCCH-type {ECO:0000313|EMBL:KVH97555.1};
GN ORFNames=Ccrd_000348 {ECO:0000313|EMBL:KVH97555.1};
OS Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae;
OC Carduinae; Cynara.
OX NCBI_TaxID=59895 {ECO:0000313|EMBL:KVH97555.1, ECO:0000313|Proteomes:UP000243975};
RN [1] {ECO:0000313|EMBL:KVH97555.1, ECO:0000313|Proteomes:UP000243975}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2C {ECO:0000313|EMBL:KVH97555.1};
RX PubMed=26786968; DOI=10.1038/srep19427;
RA Scaglione D., Reyes-Chin-Wo S., Acquadro A., Froenicke L., Portis E.,
RA Beitel C., Tirone M., Mauro R., Lo Monaco A., Mauromicale G., Faccioli P.,
RA Cattivelli L., Rieseberg L., Michelmore R., Lanteri S.;
RT "The genome sequence of the outbreeding globe artichoke constructed de novo
RT incorporating a phase-aware low-pass sequencing strategy of F1 progeny.";
RL Sci. Rep. 6:19427-19427(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KVH97555.1}.
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DR EMBL; LEKV01003825; KVH97555.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A124SDP1; -.
DR STRING; 59895.A0A124SDP1; -.
DR EnsemblPlants; KVH97555; KVH97555; Ccrd_000348.
DR Gramene; KVH97555; KVH97555; Ccrd_000348.
DR OMA; HMQGQYA; -.
DR OrthoDB; 399076at2759; -.
DR Proteomes; UP000243975; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR041686; Znf-CCCH_3.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR15725:SF14; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 17; 1.
DR PANTHER; PTHR15725; ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING; 1.
DR Pfam; PF14608; zf-CCCH_2; 1.
DR Pfam; PF15663; zf-CCCH_3; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000243975};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 39..68
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 70..96
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 123..150
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 39..68
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 70..96
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 123..150
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 154..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 209..321
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 345..561
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 623..653
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..169
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 261..282
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 295..321
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 345..392
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 403..423
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 451..539
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 623..642
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 653 AA; 73754 MW; F507D05441310D87 CRC64;
MVGGTTHQPQ QASQLVAPPL SSSSSSTAPA TTPEEDELLK RNTDCVYFLA SPLTCKKGSE
CEYRHSDIAR VNPRDCWYWL NGSCLNPKCG FRHPPLDGLL GADISTPVGP SVPPPHPAPY
AVPKQGVACI FFQKGYCLKG HLCPFLHGPP NSVNNKAAQS GSANPISEPP KTAFSGPEKS
FQDQKLTQPV TAQKPVEFLV PQAVRMQAPP LARNGGNGDK KAPPPSSSMG VEELPRYKSG
RVVPPPVVNE TPASKPNRGV YHHVSDNDRI LNGKDADEYS REPSPGFDVL VDNELGDSEY
YRNKDEFGRS RRNDYDLDRP TDYDVDREIY RDYDHYNERQ GERYAWDERR SSSERMLDPS
AHLERRSYPR NASPDHFDES DLRHRISKQR RVSDNGLRSV VSREGRTPRR DSHHHRHQDQ
GGLSSRLRGR IKIPGRSVSP TNGRPPLSVN HTRLWDRKKD TNNDPRDHKG FSRTPDNDSE
FAGPKRLSEL KKGYEQQPND ERQVLGKRKY PNEEDLSFEG PKPLSEILKS KRGSETARIK
NKPDSYVNNT ENNEKEREMV VAEKEENVSA IVEAEKEEKP VAAIVEAEKV RDSVSGIDED
ALLDEELEGY EDREGEYEYV DGEEEYNMDD EEEGEYVDEE EEYGKKEESV VYL
//
