ID A0A124SF72_CYNCS Unreviewed; 777 AA.
AC A0A124SF72;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE SubName: Full=DNA mismatch repair protein MutS, core {ECO:0000313|EMBL:KVI02323.1};
DE Flags: Fragment;
GN ORFNames=Ccrd_019389 {ECO:0000313|EMBL:KVI02323.1};
OS Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae;
OC Carduinae; Cynara.
OX NCBI_TaxID=59895 {ECO:0000313|EMBL:KVI02323.1, ECO:0000313|Proteomes:UP000243975};
RN [1] {ECO:0000313|EMBL:KVI02323.1, ECO:0000313|Proteomes:UP000243975}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2C {ECO:0000313|EMBL:KVI02323.1};
RX PubMed=26786968; DOI=10.1038/srep19427;
RA Scaglione D., Reyes-Chin-Wo S., Acquadro A., Froenicke L., Portis E.,
RA Beitel C., Tirone M., Mauro R., Lo Monaco A., Mauromicale G., Faccioli P.,
RA Cattivelli L., Rieseberg L., Michelmore R., Lanteri S.;
RT "The genome sequence of the outbreeding globe artichoke constructed de novo
RT incorporating a phase-aware low-pass sequencing strategy of F1 progeny.";
RL Sci. Rep. 6:19427-19427(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KVI02323.1}.
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DR EMBL; LEKV01002657; KVI02323.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A124SF72; -.
DR STRING; 59895.A0A124SF72; -.
DR EnsemblPlants; KVI02323; KVI02323; Ccrd_019389.
DR Gramene; KVI02323; KVI02323; Ccrd_019389.
DR OMA; METHQDG; -.
DR Proteomes; UP000243975; Unassembled WGS sequence.
DR GO; GO:0000794; C:condensed nuclear chromosome; IEA:EnsemblPlants.
DR GO; GO:0043073; C:germ cell nucleus; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0030983; F:mismatched DNA binding; IEA:InterPro.
DR GO; GO:0051026; P:chiasma assembly; IEA:EnsemblPlants.
DR GO; GO:0010777; P:meiotic mismatch repair involved in reciprocal meiotic recombination; IEA:EnsemblPlants.
DR Gene3D; 1.10.1420.10; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR000432; DNA_mismatch_repair_MutS_C.
DR InterPro; IPR007696; DNA_mismatch_repair_MutS_core.
DR InterPro; IPR036187; DNA_mismatch_repair_MutS_sf.
DR InterPro; IPR045076; MutS_family.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11361; DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER; 1.
DR PANTHER; PTHR11361:SF20; MUTS PROTEIN HOMOLOG 5; 1.
DR Pfam; PF05192; MutS_III; 1.
DR Pfam; PF00488; MutS_V; 1.
DR SMART; SM00534; MUTSac; 1.
DR SMART; SM00533; MUTSd; 1.
DR SUPFAM; SSF48334; DNA repair protein MutS, domain III; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000243975}.
FT DOMAIN 256..590
FT /note="DNA mismatch repair protein MutS core"
FT /evidence="ECO:0000259|SMART:SM00533"
FT DOMAIN 605..776
FT /note="DNA mismatch repair proteins mutS family"
FT /evidence="ECO:0000259|SMART:SM00534"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 777
FT /evidence="ECO:0000313|EMBL:KVI02323.1"
SQ SEQUENCE 777 AA; 88003 MW; 4B9CB8A2CB4E13EB CRC64;
MEEVDETEAV PQNNLTNPVK EEDERNRGLI ESDRVGISYY DSLTCELHVL ELWEDGTAEF
PLIDMGKILF YFSSYLHYLI QVVANFINSS TKFGETKFSS LERVKPLIIY TSTKSEESLL
AALQPNDGAN GMPTVKLMKS SIFSYEQAWH RLVYLRVSGM DDGLNIKERI CFLSSMMDIE
SEVQVRASGG LLAILENERV VDTIEQNECG SVSITIDSVM QISLNNFLIV DSAAHEALQI
FQTDKHPSHM GIGRAKEGFS VFGMMNKCVT PMGKRLLRTW FLRPILDLDN LNGRLNIQIS
FFVSSDELLT SLRDTLKFVK DVPHILKKFN SPSSVCTCGD WTAFLKSLSA LLHINKIFEL
GISENLQEHV NNLSIHIVEK VIGVIDVNRS KDKGYETTVK DGFCDELDEL RQIYEELPEF
LEEVLLVPIM NGVSYVSALE LARLPYMSRN KLLPQIVYIS QIGYLMCFFE EKPDEFILEK
LEDYEFAFSE EDGDVRKFYY RNAKTRELDS LLGDIYHKIL DMERAITRDL VSHILEFSMH
LLKGINFAAE LDCFLSLALV ARQNNYVRPT LTAETVLDIR NGRHVLQEMT VDTFIPNDTK
IIDYGNIHII TGPNYSGKSI YIKQVALIVF LAHVGSFVPA DTAKVGLTDR IFCAMGSKVM
TAEQSTFMID LHQVGMMLRH ATSRSLCLLD EFGKGTLTED DFILYANNAT ISFLDGIGLL
GGTIDYFTSM HAPPKVLICT HLTQIFADSH LSESNKVKYY TMSVLRPDNN SEDIEEI
//
