ID   A0A124SGN6_CYNCS        Unreviewed;       635 AA.
AC   A0A124SGN6;
DT   13-APR-2016, integrated into UniProtKB/TrEMBL.
DT   13-APR-2016, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   SubName: Full=Putative domain XH {ECO:0000313|EMBL:KVI06947.1};
GN   ORFNames=Ccrd_014692 {ECO:0000313|EMBL:KVI06947.1};
OS   Cynara cardunculus var. scolymus (Globe artichoke) (Cynara scolymus).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae;
OC   Carduinae; Cynara.
OX   NCBI_TaxID=59895 {ECO:0000313|EMBL:KVI06947.1, ECO:0000313|Proteomes:UP000243975};
RN   [1] {ECO:0000313|EMBL:KVI06947.1, ECO:0000313|Proteomes:UP000243975}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=2C {ECO:0000313|EMBL:KVI06947.1};
RX   PubMed=26786968; DOI=10.1038/srep19427;
RA   Scaglione D., Reyes-Chin-Wo S., Acquadro A., Froenicke L., Portis E.,
RA   Beitel C., Tirone M., Mauro R., Lo Monaco A., Mauromicale G., Faccioli P.,
RA   Cattivelli L., Rieseberg L., Michelmore R., Lanteri S.;
RT   "The genome sequence of the outbreeding globe artichoke constructed de novo
RT   incorporating a phase-aware low-pass sequencing strategy of F1 progeny.";
RL   Sci. Rep. 6:19427-19427(2016).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KVI06947.1}.
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DR   EMBL; LEKV01001539; KVI06947.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A124SGN6; -.
DR   STRING; 59895.A0A124SGN6; -.
DR   EnsemblPlants; KVI06947; KVI06947; Ccrd_014692.
DR   Gramene; KVI06947; KVI06947; Ccrd_014692.
DR   OMA; CCPNKKK; -.
DR   Proteomes; UP000243975; Unassembled WGS sequence.
DR   GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR   CDD; cd12266; RRM_like_XS; 1.
DR   Gene3D; 3.30.70.2890; XS domain; 1.
DR   InterPro; IPR045177; FDM1-5/IDN2.
DR   InterPro; IPR005379; FDM1-5/IDN2_XH.
DR   InterPro; IPR005380; XS_domain.
DR   InterPro; IPR038588; XS_domain_sf.
DR   InterPro; IPR005381; Znf-XS_domain.
DR   PANTHER; PTHR21596:SF65; PROTEIN INVOLVED IN DE NOVO 2-RELATED; 1.
DR   PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR   Pfam; PF03469; XH; 1.
DR   Pfam; PF03468; XS; 1.
DR   Pfam; PF03470; zf-XS; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000243975};
KW   RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT   DOMAIN          47..90
FT                   /note="Zinc finger-XS"
FT                   /evidence="ECO:0000259|Pfam:PF03470"
FT   DOMAIN          124..234
FT                   /note="XS"
FT                   /evidence="ECO:0000259|Pfam:PF03468"
FT   DOMAIN          502..632
FT                   /note="Factor of DNA methylation 1-5/IDN2"
FT                   /evidence="ECO:0000259|Pfam:PF03469"
FT   REGION          1..28
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          370..404
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          335..366
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          409..491
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1..24
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   635 AA;  73862 MW;  2865E37B16F9263F CRC64;
     MEDCMDHSSG EDTDGDDSEV EEYEEKSYEE LKGGKYRVKL SDETFACPYC TNKKKRDYQY
     KELLQHATMV GKSDSQKRSL RDKANHLALV KYLEKDIFQQ DTAKASGPSQ STDEVDHLAE
     HDGDEMFVWP WKGIFVNIPT RLEEGRYVGK SGSTMRDYLT TRGFNPTRVL PLWNFRGHSG
     CAVVEFRKDW AGFNNAMSFE KAYEADHQGE RDWKVDKDPK SGIYGWVARS KDYRADNIIG
     EHLRKVGDLR TVADIMAEEE RKTGKLMSTL TNVIEVKKRH LEEMQSKFVE TENSLSKLIA
     EKDKLHQHYN EVTKLVSPFY LSEIKKIGNG AREHFQRILN DHEKIKLQLE SEKRELELRG
     HELEKREVLN ENEQKRLSDE IEENAAKNSV LQMASDEQRK ADESVMKLAD DQKREKEELH
     KKIILLEKQL DAKQAAVLEI ERLRGQLNVM KHMGDDDKEV LKKVEDIHKN LREKEEELED
     LESLNQTLGL KELSKTSHIG VKRMGELENK PFIDVMKRKY NGPEAEDRAS ELCSLWEEYL
     RDPNWHPFRV ITVNGTSQGV IDENDEKLNS LRRDLGEDVY KAVATALTEI NDYNPSGRYI
     TTELWNFNEG RKATLKEGVS YLLKMWDVQK RKRVM
//