ID A0A126PB66_9BACT Unreviewed; 479 AA.
AC A0A126PB66;
DT 11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT 11-MAY-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=tRNA nucleotidyltransferase {ECO:0000313|EMBL:AMJ66350.1};
GN ORFNames=AXW84_13600 {ECO:0000313|EMBL:AMJ66350.1};
OS Hymenobacter sp. PAMC 26628.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Hymenobacter.
OX NCBI_TaxID=1484118 {ECO:0000313|EMBL:AMJ66350.1, ECO:0000313|Proteomes:UP000059956};
RN [1] {ECO:0000313|EMBL:AMJ66350.1, ECO:0000313|Proteomes:UP000059956}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PAMC26628 {ECO:0000313|EMBL:AMJ66350.1,
RC ECO:0000313|Proteomes:UP000059956};
RA Wen L., He K., Yang H.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC polymerase family. {ECO:0000256|RuleBase:RU003953}.
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DR EMBL; CP014304; AMJ66350.1; -; Genomic_DNA.
DR RefSeq; WP_068234147.1; NZ_CP014304.1.
DR AlphaFoldDB; A0A126PB66; -.
DR STRING; 1484118.AXW84_13600; -.
DR KEGG; hyz:AXW84_13600; -.
DR OrthoDB; 9805698at2; -.
DR Proteomes; UP000059956; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0031123; P:RNA 3'-end processing; IEA:UniProt.
DR GO; GO:0042245; P:RNA repair; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR CDD; cd00077; HDc; 1.
DR CDD; cd05398; NT_ClassII-CCAase; 1.
DR Gene3D; 1.10.246.80; -; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 1.10.3090.10; cca-adding enzyme, domain 2; 1.
DR InterPro; IPR032810; CCA-adding_enz_C.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR002646; PolA_pol_head_dom.
DR InterPro; IPR032828; PolyA_RNA-bd.
DR PANTHER; PTHR47545; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR PANTHER; PTHR47545:SF1; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF01743; PolyA_pol; 1.
DR Pfam; PF12627; PolyA_pol_RNAbd; 1.
DR Pfam; PF13735; tRNA_NucTran2_2; 1.
DR SMART; SM00471; HDc; 1.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF81891; Poly A polymerase C-terminal region-like; 1.
PE 3: Inferred from homology;
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000059956};
KW RNA repair {ECO:0000256|ARBA:ARBA00022800};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU003953};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003953};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 254..378
FT /note="HD/PDEase"
FT /evidence="ECO:0000259|SMART:SM00471"
SQ SEQUENCE 479 AA; 53358 MW; B60DE0C7E812B5F1 CRC64;
MNTPELPDLP IFRTIADAAG ALGQPAYVIG GYVRDLALGR ASKDIDVVTV GDGIALAEEV
GRRLPGRGKV TVFKNFGTAM LPTQEAGEIE FVGARKESYR AESRKPEVET GTLEDDLARR
DFTINALGLS LNPADFGALV DRYGGMQDLS TQTIRTPLGP DVTFSDDPLR MMRAVRFASQ
LGFDIEPDTY DAIVRNKERI KIVSQERITT ELNKIIESPL PSYGFKLLFQ TGLLHLVFPK
MAQLYGVEKV GKQTHKDNFY HTLQVLDNVA AAGGDLWLRW AAVLHDIAKP ATKRYFPAQG
WTFHGHEDKG ARWVPGIFAD LKLPQGEEMR MVQKLVRLHL RPIALVKETV TAAAVRRLLF
EAGDDIDRLM LLCRADITSK DHERKARYLR NFTEVEEKLK EVEAQDHLRN FKPVITGEII
MEAFGLKPSK DVGELKNAVL EAILEGTIKN EMAEAWAFLL QQGAARGLRP EGTSFHSPV
//
