ID A0A132N942_HYDSH Unreviewed; 184 AA.
AC A0A132N942;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 13-SEP-2023, entry version 25.
DE RecName: Full=Ribosome hibernation promoting factor {ECO:0000256|HAMAP-Rule:MF_00839};
DE Short=HPF {ECO:0000256|HAMAP-Rule:MF_00839};
GN Name=hpf {ECO:0000256|HAMAP-Rule:MF_00839};
GN Synonyms=raiA {ECO:0000313|EMBL:MBT9281207.1};
GN ORFNames=KM312_00825 {ECO:0000313|EMBL:MBT9281207.1}, SA87_02795
GN {ECO:0000313|EMBL:OAR03613.1};
OS Hydrogenibacillus schlegelii (Bacillus schlegelii).
OC Bacteria; Bacillota; Bacilli; Bacillales;
OC Bacillales Family X. Incertae Sedis; Hydrogenibacillus.
OX NCBI_TaxID=1484 {ECO:0000313|EMBL:OAR03613.1, ECO:0000313|Proteomes:UP000243024};
RN [1] {ECO:0000313|EMBL:OAR03613.1, ECO:0000313|Proteomes:UP000243024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MA 48 {ECO:0000313|EMBL:OAR03613.1,
RC ECO:0000313|Proteomes:UP000243024};
RA Hemp J.;
RT "Draft genome sequence of Hydrogenibacillus schlegelii DSM 2000.";
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:MBT9281207.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RBS10-49 {ECO:0000313|EMBL:MBT9281207.1};
RA Kadnikov V., Mardanov A.V., Beletsky A.V., Karnachuk O.V., Ravin N.V.;
RT "Metagenomic Analysis of the Microbial Community in the Underground Coal
RT Fire Area (Kemerovo Region, Russia) Revealed Predominance of Thermophilic
RT Members of the Phyla Deinococcus-thermus, Aquificae, and Firmicutes.";
RL Microbiology 0:0-0(2021).
CC -!- FUNCTION: Required for dimerization of active 70S ribosomes into 100S
CC ribosomes in stationary phase; 100S ribosomes are translationally
CC inactive and sometimes present during exponential growth.
CC {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- SUBUNIT: Interacts with 100S ribosomes. {ECO:0000256|HAMAP-
CC Rule:MF_00839}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- SIMILARITY: Belongs to the HPF/YfiA ribosome-associated protein family.
CC Long HPF subfamily. {ECO:0000256|HAMAP-Rule:MF_00839}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAR03613.1}.
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DR EMBL; JAHHQF010000037; MBT9281207.1; -; Genomic_DNA.
DR EMBL; JXBB01000055; OAR03613.1; -; Genomic_DNA.
DR RefSeq; WP_066203032.1; NZ_PEBV01000005.1.
DR AlphaFoldDB; A0A132N942; -.
DR STRING; 1484.SA87_02795; -.
DR OrthoDB; 9794975at2; -.
DR Proteomes; UP000243024; Unassembled WGS sequence.
DR Proteomes; UP000748108; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR CDD; cd00552; RaiA; 1.
DR Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR HAMAP; MF_00839; HPF; 1.
DR InterPro; IPR034694; HPF_long/plastid.
DR InterPro; IPR036567; RHF-like.
DR InterPro; IPR003489; RHF/RaiA.
DR InterPro; IPR032528; Ribosom_S30AE_C.
DR InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR NCBIfam; TIGR00741; yfiA; 1.
DR PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR Pfam; PF16321; Ribosom_S30AE_C; 1.
DR Pfam; PF02482; Ribosomal_S30AE; 1.
DR SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839};
KW Reference proteome {ECO:0000313|Proteomes:UP000243024};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845, ECO:0000256|HAMAP-
KW Rule:MF_00839}.
FT DOMAIN 122..178
FT /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF16321"
SQ SEQUENCE 184 AA; 20996 MW; 743B03B28F2DDFCC CRC64;
MRFLIRGENV EVTEALRAYA EKRLGGMLEK YFAEDASLTV HVTMKVYRDG HRVEVTIPTP
GLILRAEDKT GDMYAAVDNV AEKIARQIRK YKTRLHRKPR ESDGLKGLFR ETAEPSDVAP
AEEAPRIVRV KRFALKPMAA EEAALQMELL GHTFYVFQNA ETDRIGIVYK RRDGSYGLIE
PEWA
//
