ID A0A136NJ09_9BACT Unreviewed; 149 AA.
AC A0A136NJ09;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KXK46138.1};
GN ORFNames=UZ10_BCD003001462 {ECO:0000313|EMBL:KXK46138.1};
OS Bacteroidetes bacterium OLB10.
OC Bacteria; Bacteroidota.
OX NCBI_TaxID=1617421 {ECO:0000313|EMBL:KXK46138.1, ECO:0000313|Proteomes:UP000070480};
RN [1] {ECO:0000313|EMBL:KXK46138.1, ECO:0000313|Proteomes:UP000070480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OLB10 {ECO:0000313|EMBL:KXK46138.1};
RA Speth D.R., In T Zandt M., Guerrero Cruz S., Jetten M.S., Dutilh B.E.;
RT "Genome based microbial ecology of anammox granules in a full-scale
RT wastewater treatment system.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KXK46138.1}.
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DR EMBL; LNBX01000031; KXK46138.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A136NJ09; -.
DR STRING; 1617421.UZ10_BCD003001462; -.
DR Proteomes; UP000070480; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF51; RNA POLYMERASE SIGMA FACTOR SIGV; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT DOMAIN 2..64
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 86..138
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 149 AA; 17569 MW; BB7CC75A1533F253 CRC64;
MYADGIYRFI LHNMKDEDDA RDVVQDTFEK CWRNHQNVTY EKAKSYLFTT AHHTMIDSLR
KSGRQETLTE YHHEPSHNRQ YSDLKQILHK ALDKLSAIQK SVILLRDYEG YDYKEIGDIT
GLSESQVKVY IYRGRVALKE YIGSMSNVL
//