ID A0A139A5W5_GONPJ Unreviewed; 1203 AA.
AC A0A139A5W5;
DT 11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT 11-MAY-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=LMBR1-domain-containing protein {ECO:0000313|EMBL:KXS12200.1};
DE Flags: Fragment;
GN ORFNames=M427DRAFT_72175 {ECO:0000313|EMBL:KXS12200.1};
OS Gonapodya prolifera (strain JEL478) (Monoblepharis prolifera).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Monoblepharidomycetes; Monoblepharidales;
OC Gonapodyaceae; Gonapodya.
OX NCBI_TaxID=1344416 {ECO:0000313|EMBL:KXS12200.1, ECO:0000313|Proteomes:UP000070544};
RN [1] {ECO:0000313|EMBL:KXS12200.1, ECO:0000313|Proteomes:UP000070544}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JEL478 {ECO:0000313|EMBL:KXS12200.1,
RC ECO:0000313|Proteomes:UP000070544};
RX PubMed=25977457; DOI=10.1093/gbe/evv090;
RA Chang Y., Wang S., Sekimoto S., Aerts A.L., Choi C., Clum A., LaButti K.M.,
RA Lindquist E.A., Yee Ngan C., Ohm R.A., Salamov A.A., Grigoriev I.V.,
RA Spatafora J.W., Berbee M.L.;
RT "Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell
RT Walls of Algal Ancestors of Land Plants.";
RL Genome Biol. Evol. 7:1590-1601(2015).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the LIMR family.
CC {ECO:0000256|ARBA:ARBA00010487}.
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DR EMBL; KQ965790; KXS12200.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A139A5W5; -.
DR STRING; 1344416.A0A139A5W5; -.
DR OrthoDB; 2731916at2759; -.
DR Proteomes; UP000070544; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR Gene3D; 1.10.472.170; -; 1.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR013150; TFIIB_cyclin.
DR PANTHER; PTHR21355:SF0; G-PROTEIN COUPLED RECEPTOR-ASSOCIATED PROTEIN LMBRD2; 1.
DR PANTHER; PTHR21355; UNCHARACTERIZED; 1.
DR Pfam; PF04791; LMBR1; 1.
DR Pfam; PF00382; TFIIB; 1.
DR PRINTS; PR00685; TIFACTORIIB.
DR SUPFAM; SSF47954; Cyclin-like; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000070544};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 304..326
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 351..371
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 441..460
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 480..499
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 519..540
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 738..759
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 779..803
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 881..898
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 149..218
FT /note="Transcription factor TFIIB cyclin-like"
FT /evidence="ECO:0000259|Pfam:PF00382"
FT REGION 585..617
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 940..1125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1143..1203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 598..617
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 978..1003
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1014..1051
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1052..1066
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1167..1181
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KXS12200.1"
SQ SEQUENCE 1203 AA; 131784 MW; C4A24ECD45BCFC6C CRC64;
MFALSASDRF LQEQMKAMNE TVALQDTVEE HSDDVEEARV RFGDLQVRFQ CKYCKDPVPN
IVEDLKGGML CCGRCGYVYV TRLLDSGAEW RNFADEGQDK SRVAKLGTGG PSNHLSGPNH
LDATSIGTLC SDKGLVKAQR TLETHVSDKD ALRDIDTICG RMGLPQYVAD HAKRVYAQAT
DMKIRGKTVE AKIGACLYLA CGAAKLKRPF EALAPVVGAD IKSIARKTAP QTNVNVRTHL
QDGTELRNQI EAVVNQLALP YKIAKAASDL AIEVKKSEIL TGRHIKTIIA AYWDTAVWVP
TKAMIWPVIL AIVFVALVTV CILWYLGDNV SAARDAEGIR GPVQSEGKVR WYAQLTAFLG
WFFPFCVPLL LPIDLASALY RLRCADEIGN STNVAVSAMP QALDFRTFNS SDPIIPDPAW
CQERMPIAFV SSEFMYIFWE LNYWTSFFLT WVVIPIMQGY RRSGKFSALD KLKEAVWSNI
VYLLAVGVVG AGFIIYIAVA NGLDFKTLTS LLIAASNAYG LTHIALFLGH GLVSFPSSLF
RSASHRYSLR TLEGKAPKNK EKAVDAESDY LEVVRDIAGV WQRLGGGGSR SQGRKVVRSR
GRAQEQPETS EEDTERLRKR AERLVEKCPL ALSPHHVGAH DDSDSTVPSV ITEAYLESLH
VRLKTAIVNK DRSDAQWERL LRQAWFLQDI VETEDGGERK LFSPLYPPPP SLHPGTRDAI
LRLRWYWFVI VYPSVKRFFG VVFALFSVCI VWSEVTFQFG AKVGRTLTLF GLFVENDDLG
YGVLEMVSFV TMLYLCVCAY SSLMKMRVFS MYVLVPDHHT DEGSMLFFAA YFCRLNFPLC
YNFLNLLTTA DSANTPATAT TFVRVIGKID LVPLLGGEFN LYFPLVIVVI CAVVFFNVHG
RLLRMCGGFG DMFFDDDEPA EDIIMEGRQL IEQARAMEER RLGRGNGGGT RDAGAGTRNG
RYGGVSATDR RRRITSDNET TGTSADVRPN QEDIETSVPS LTSRLVKPFL KNGNKDPITQ
TNFLPPSRMS QPSTSRSSVP SRQSQARQSG DSDVGDSERR ELLGPARPDS RTSQKLGGGP
SGLGIGQMFG GRSRGITGEG GGMSGPERES DFAGGGYSMD SGQSEGGFSS AIKGFLGKWN
GTAPKSGGYT SLGGGAGGGG SAQAAVSPAA RQLSPSPRKT TPTFARAGGA PKKTIPTGLF
DDI
//
