GenomeNet

Database: UniProt
Entry: A0A139CIS1_9EURY
LinkDB: A0A139CIS1_9EURY
Original site: A0A139CIS1_9EURY 
ID   A0A139CIS1_9EURY        Unreviewed;       210 AA.
AC   A0A139CIS1;
DT   11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT   11-MAY-2016, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=Small ribosomal subunit protein uS5 {ECO:0000256|ARBA:ARBA00035255, ECO:0000256|HAMAP-Rule:MF_01307};
GN   Name=rps5 {ECO:0000256|HAMAP-Rule:MF_01307};
GN   ORFNames=AWU59_2268 {ECO:0000313|EMBL:KXS41092.1};
OS   Methanolobus sp. T82-4.
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanolobus.
OX   NCBI_TaxID=1794908 {ECO:0000313|EMBL:KXS41092.1, ECO:0000313|Proteomes:UP000074030};
RN   [1] {ECO:0000313|EMBL:KXS41092.1, ECO:0000313|Proteomes:UP000074030}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=T82-4 {ECO:0000313|EMBL:KXS41092.1};
RA   Wolfe R., Daly R., Wrighton K.;
RT   "Methanolobus T82 Annotated.";
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: With S4 and S12 plays an important role in translational
CC       accuracy. {ECO:0000256|HAMAP-Rule:MF_01307}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S4.
CC       {ECO:0000256|HAMAP-Rule:MF_01307}.
CC   -!- DOMAIN: The N-terminal domain interacts with the head of the 30S
CC       subunit; the C-terminal domain interacts with the body and contacts
CC       protein S4. The interaction surface between S4 and S5 is involved in
CC       control of translational fidelity. {ECO:0000256|HAMAP-Rule:MF_01307}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC       {ECO:0000256|ARBA:ARBA00008945, ECO:0000256|HAMAP-Rule:MF_01307,
CC       ECO:0000256|RuleBase:RU003823}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KXS41092.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LSRV01000093; KXS41092.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A139CIS1; -.
DR   STRING; 1794908.AWU59_2268; -.
DR   PATRIC; fig|1794908.3.peg.1704; -.
DR   Proteomes; UP000074030; Unassembled WGS sequence.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.160.20; -; 1.
DR   Gene3D; 3.30.230.10; -; 1.
DR   HAMAP; MF_01307_A; Ribosomal_S5_A; 1.
DR   InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR   InterPro; IPR000851; Ribosomal_uS5.
DR   InterPro; IPR047866; Ribosomal_uS5_arc.
DR   InterPro; IPR005324; Ribosomal_uS5_C.
DR   InterPro; IPR005711; Ribosomal_uS5_euk/arc.
DR   InterPro; IPR013810; Ribosomal_uS5_N.
DR   InterPro; IPR018192; Ribosomal_uS5_N_CS.
DR   InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR   NCBIfam; TIGR01020; uS5_euk_arch; 1.
DR   PANTHER; PTHR13718:SF4; 40S RIBOSOMAL PROTEIN S2; 1.
DR   PANTHER; PTHR13718; RIBOSOMAL S SUBUNIT; 1.
DR   Pfam; PF00333; Ribosomal_S5; 1.
DR   Pfam; PF03719; Ribosomal_S5_C; 1.
DR   SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR   SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR   PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR   PROSITE; PS50881; S5_DSRBD; 1.
PE   3: Inferred from homology;
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_01307};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_01307}; RNA-binding {ECO:0000256|HAMAP-Rule:MF_01307};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01307}.
FT   DOMAIN          50..113
FT                   /note="S5 DRBM"
FT                   /evidence="ECO:0000259|PROSITE:PS50881"
SQ   SEQUENCE   210 AA;  22933 MW;  42AAA5B0F77B5E97 CRC64;
     MAYNYEEEWV PQTRLGKLVH EGQITSMDEA IDSGLPVRES KVIDILLPDL EDEVLDINMV
     QRMTDSGRRV KFRATVIVGN GDGFVGLGQA KDVQVGPAIR KAIDNAKINI LKVKRGCGSW
     ECACGREHTV PSEVRGKAGS VIVELKPAPR GLGLAAGDTA RKVLEKAGIK DVWTRTEGTT
     RTTLNFAKAT FNALHNTGTV RQPIRLEEEA
//
DBGET integrated database retrieval system