ID A0A139SXD9_9GAMM Unreviewed; 1163 AA.
AC A0A139SXD9;
DT 11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT 11-MAY-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=DNA polymerase III subunit alpha {ECO:0000256|ARBA:ARBA00019114};
DE EC=2.7.7.7 {ECO:0000256|ARBA:ARBA00012417};
GN ORFNames=AXE65_00640 {ECO:0000313|EMBL:KXU39071.1};
OS Ventosimonas gracilis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Ventosimonadaceae; Ventosimonas.
OX NCBI_TaxID=1680762 {ECO:0000313|EMBL:KXU39071.1, ECO:0000313|Proteomes:UP000072660};
RN [1] {ECO:0000313|EMBL:KXU39071.1, ECO:0000313|Proteomes:UP000072660}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CV58 {ECO:0000313|EMBL:KXU39071.1,
RC ECO:0000313|Proteomes:UP000072660};
RA Wen L., He K., Yang H.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC Evidence={ECO:0000256|ARBA:ARBA00024632};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KXU39071.1}.
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DR EMBL; LSZO01000046; KXU39071.1; -; Genomic_DNA.
DR RefSeq; WP_068387564.1; NZ_LSZO01000046.1.
DR AlphaFoldDB; A0A139SXD9; -.
DR OrthoDB; 9803237at2; -.
DR Proteomes; UP000072660; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd04485; DnaE_OBF; 1.
DR CDD; cd07433; PHP_PolIIIA_DnaE1; 1.
DR Gene3D; 1.10.150.870; -; 1.
DR Gene3D; 1.10.10.1600; Bacterial DNA polymerase III alpha subunit, thumb domain; 1.
DR Gene3D; 3.20.20.140; Metal-dependent hydrolases; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011708; DNA_pol3_alpha_NTPase_dom.
DR InterPro; IPR041931; DNA_pol3_alpha_thumb_dom.
DR InterPro; IPR040982; DNA_pol3_finger.
DR InterPro; IPR048472; DNA_pol_IIIA_C.
DR InterPro; IPR004805; DnaE2/DnaE/PolC.
DR InterPro; IPR029460; DNAPol_HHH.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004365; NA-bd_OB_tRNA.
DR InterPro; IPR004013; PHP_dom.
DR InterPro; IPR003141; Pol/His_phosphatase_N.
DR InterPro; IPR016195; Pol/histidinol_Pase-like.
DR InterPro; IPR049821; PolIIIA_DnaE1_PHP.
DR NCBIfam; TIGR00594; polc; 1.
DR PANTHER; PTHR32294; DNA POLYMERASE III SUBUNIT ALPHA; 1.
DR PANTHER; PTHR32294:SF0; DNA POLYMERASE III SUBUNIT ALPHA; 1.
DR Pfam; PF07733; DNA_pol3_alpha; 1.
DR Pfam; PF17657; DNA_pol3_finger; 1.
DR Pfam; PF20914; DNA_pol_IIIA_C; 1.
DR Pfam; PF14579; HHH_6; 1.
DR Pfam; PF02811; PHP; 1.
DR Pfam; PF01336; tRNA_anti-codon; 1.
DR SMART; SM00481; POLIIIAc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF89550; PHP domain-like; 1.
PE 4: Predicted;
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000072660};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 6..73
FT /note="Polymerase/histidinol phosphatase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00481"
SQ SEQUENCE 1163 AA; 128955 MW; 58FDDC7F89CEA5F6 CRC64;
MSATFVHLRL HSEFSLNDGL VRVAALAEAV AKAGMPAVAV TDQSNLHGLI KFYKATHKLG
IKPIVGADIW LSAATDDGAL SKLTLLVMNQ TGYRNLTELL SQSWLKGQQE GIAVTQRDWL
QGATDGLIAL SCSREGDIAA ALRTADETAA ETLLKYWQAL FPGRFYLEVQ RSGRDGDEDH
LHAAASLAER TAVPLVATCD VRFLRQDEFE AHEARVCIGE GRILDDPQRP RPYCDQQYLK
TPEEMAELFA DLPEALANTV EIAKRCNLEL RLGKAVLPDF PTPNGMSMDE FLRHSAKEGL
LQRLAAHGTG GRPQQAYDER LEFELATIIQ MGFAGYFLIV ADFIQWAKNH EVPVGPGRGS
GAGSLVAWVL GITDLDPLAY DLLFERFLNP ERVSMPDFDV DFCMDGRDRV IEYVANKYGR
EAVSQIVTFG SMAAKAVVRD VARVQGKSYG LADRLSKMIP FEIGITLEKA RAQEEPLREF
LEKDEEAAEI WEMSLQLEGI TRGTGKHAGG VVIAPTKLTD FTPLTCDEDG SGLITQFDKD
DVEAAGLVKF DFLGLRTLTI IKWALSTIHR EQKKQGVPEA DWVNIEKIPL DDAKTFAMLQ
RGETTAVFQL ESRGMRELVK KLKPDCLDDL IALVALFRPG PLQSGMVDDF INRKHGKAPL
AYPHPDYQYQ GLKPVLESTY GIILYQEQVM QIAQVMAGYS LGGADMLRRA MGKKKPEEMA
KQRGGFIEGC AKNGIDGNLA ANIFDLVEKF AGYGFNKSHS AAYGLVAYQT AWLKAHYPAP
FMAAVLSAEM HNTDKVVIMI EECRSMKLVI EPPNVNRSDY QFTVNEQGQI VYGLGAIKGV
GEGPVLSIQN SRAKDGEFKD LFDFCQRIDR RSLNKRTLEA LIRSGALDAL APDKTDLDQG
RAILLASMDE AVQAAEQSAR SRESGHQDLF GSLLSESAAD VYQNARKAPP LSISQRLEGE
KDCLGLYLTG HPIDEYEAEI RRFAPERIAR LKPSRDTQKV AGLLLSLRVT KNKKGEKMAF
ITLDDRSARI EASLFGEQFS EHQDLLHSGA LLVVEGEVSQ DDFNGGLRLR SSKLMSLAQM
RSSQVQSLCV QACNETLMPK YLPQLAELCR KYPGSCPVTV DFRGKNARAR LRFGENWRIE
PCENLLRSLR TQFGKTQVSL HYR
//