ID A0A142XBT6_9BACT Unreviewed; 613 AA.
AC A0A142XBT6;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=ECF RNA polymerase sigma factor SigE {ECO:0000313|EMBL:AMV24202.1};
GN Name=sigE_12 {ECO:0000313|EMBL:AMV24202.1};
GN ORFNames=VT84_07380 {ECO:0000313|EMBL:AMV24202.1};
OS Gemmata sp. SH-PL17.
OC Bacteria; Planctomycetota; Planctomycetia; Gemmatales; Gemmataceae;
OC Gemmata.
OX NCBI_TaxID=1630693 {ECO:0000313|EMBL:AMV24202.1, ECO:0000313|Proteomes:UP000076098};
RN [1] {ECO:0000313|EMBL:AMV24202.1, ECO:0000313|Proteomes:UP000076098}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SH-PL17 {ECO:0000313|EMBL:AMV24202.1,
RC ECO:0000313|Proteomes:UP000076098};
RA van der Voort M., Raaijmakers J.M.;
RT "Genome minning of novel planctomycete species.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; CP011271; AMV24202.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A142XBT6; -.
DR STRING; 1630693.VT84_07380; -.
DR KEGG; ges:VT84_07380; -.
DR OrthoDB; 9784272at2; -.
DR Proteomes; UP000076098; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR003715; Poly_export_N.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF02563; Poly_export; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000076098}.
FT DOMAIN 40..105
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 128..180
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 420..494
FT /note="Polysaccharide export protein N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02563"
FT COILED 284..314
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 613 AA; 65215 MW; 3CBEEEEC66AA0F38 CRC64;
MRRVFDLWRR FGAVPASGVP DDELLHRFAR NRDPDAFAAL LNRHGPLVYG ACRRLLPDPL
DVEDAFQAAF LVLVRRAEAL RGRPVGPWLH RVAVLTARSL RRRNAVRFAN ASALVEVAAR
PSAPDARLDV DAALSALPRK YREPVILCHL QGWTRRELAD HLGCPESTAA SLVARGLAKL
RHRLAGCDPA VVLAVAGSAV VPPTLTAAAV RAAIVYATSF SDAAVPPAVA ALTNGVLRMV
RLKKLAAVST VLVAVLALGA GLVGWPAPSA RAQPGQPNVP ASDRAKVERE LEAAKRRVEE
LEAERKRLAE AEQNATPRLL IEVGGGPSPR IVVTEFKAGG KAVGTIETTS LEMLGRFLAR
SRNDTAGPKT LSVRVDERCP QAVLKEFVAT VKAAGFDPLP FTVVDAVSGP APVELGAKSL
PPYVIEPPDM LSVEVVVKRK DPKNPVTVPL PVQPISGPFQ VRPDGTVGLG YWGNVALSGR
TLDEAVGVIR SHVAGSGALK NLGIGADALA VIVDVVAYNS KRYYVILGGG DAGDQVIALP
VTGSDTVLDA LANSQIAQVA IKPGTEISLA RMEKGSKEWK ILPVDWVALT QHGITHTNYQ
LVPGDRIHVK PKK
//
