ID A0A142XFE8_9BACT Unreviewed; 608 AA.
AC A0A142XFE8;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=ECF RNA polymerase sigma factor SigE {ECO:0000313|EMBL:AMV25140.1};
GN Name=sigE_19 {ECO:0000313|EMBL:AMV25140.1};
GN ORFNames=VT84_12145 {ECO:0000313|EMBL:AMV25140.1};
OS Gemmata sp. SH-PL17.
OC Bacteria; Planctomycetota; Planctomycetia; Gemmatales; Gemmataceae;
OC Gemmata.
OX NCBI_TaxID=1630693 {ECO:0000313|EMBL:AMV25140.1, ECO:0000313|Proteomes:UP000076098};
RN [1] {ECO:0000313|EMBL:AMV25140.1, ECO:0000313|Proteomes:UP000076098}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SH-PL17 {ECO:0000313|EMBL:AMV25140.1,
RC ECO:0000313|Proteomes:UP000076098};
RA van der Voort M., Raaijmakers J.M.;
RT "Genome minning of novel planctomycete species.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; CP011271; AMV25140.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A142XFE8; -.
DR STRING; 1630693.VT84_12145; -.
DR KEGG; ges:VT84_12145; -.
DR OrthoDB; 243813at2; -.
DR Proteomes; UP000076098; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF51; ECF RNA POLYMERASE SIGMA-E FACTOR; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000076098}.
FT DOMAIN 37..95
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 131..182
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT REGION 107..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 107..123
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 608 AA; 67542 MW; A4C7E77F304B921E CRC64;
MHAPLTRLAA QLVPPQPDGE LLARFVRDRD EVAFAALVHR HGPTVYGVCR RRLGNGADAD
DAFQAVFLVL MTRAGALPPG SALGGWLHGV AVRVADKART SFARLRKHER RAAEARSERT
SDPLPDEPPV WLDREVAALP ERYREPVVRC LIQERSRAEV AAELGIPEGT LASRLDTARK
RLADRLARHR APLVFGALLV PVPVTLAATT VSRVTDGAGA AIHQLANEVA NAMHTNTTRI
VVVAAGALCS AGGLLLAAGG GDFPAPQPLN HVVAHRPAPV PPEPEWVVAF RKTYALKDGE
YAKRVAPPYI DARKEYMYRE LYGNKQTPEV EAQVRERLDG QLPFLTLFLN FDEGKLTRRV
IRSSIGLAKI PKYQSGERIM NVWDAVTYVT GLEHPEIVID PKSKGHPLLS TREEVIDGAG
IRGNLTVNGD FVTRKDAPLD KLVPQLERIF REECKLDVRL TVKEEEQEVF VVGGTFKPNP
PAWRPKKELD FYATEEGLNK EYDHFGTDND KTPNWKTVDT SLRIGTLVTL VRSIGDRLGT
RMVWDTPLPT VPRVSWHHHT IRNPTKEQEA VDRDPEKILP VVTAQTGLTF KKETRRVQVL
YLSAPEQK
//
