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Database: UniProt
Entry: A0A143HM76_9GAMM
LinkDB: A0A143HM76_9GAMM
Original site: A0A143HM76_9GAMM 
ID   A0A143HM76_9GAMM        Unreviewed;       297 AA.
AC   A0A143HM76;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=5'-3' exonuclease {ECO:0000313|EMBL:AMX02798.1};
GN   ORFNames=A3224_09595 {ECO:0000313|EMBL:AMX02798.1};
OS   Microbulbifer thermotolerans.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC   Microbulbiferaceae; Microbulbifer.
OX   NCBI_TaxID=252514 {ECO:0000313|EMBL:AMX02798.1, ECO:0000313|Proteomes:UP000076077};
RN   [1] {ECO:0000313|Proteomes:UP000076077}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DAU221 {ECO:0000313|Proteomes:UP000076077};
RA   Lee Y.-S., Choi Y.-L.;
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP014864; AMX02798.1; -; Genomic_DNA.
DR   RefSeq; WP_067153792.1; NZ_CP014864.1.
DR   AlphaFoldDB; A0A143HM76; -.
DR   STRING; 252514.A3224_09595; -.
DR   GeneID; 76608303; -.
DR   KEGG; mthd:A3224_09595; -.
DR   OrthoDB; 9806424at2; -.
DR   Proteomes; UP000076077; Chromosome.
DR   GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR   CDD; cd09898; H3TH_53EXO; 1.
DR   CDD; cd09859; PIN_53EXO; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR   InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR   InterPro; IPR002421; 5-3_exonuclease.
DR   InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR   InterPro; IPR020045; DNA_polI_H3TH.
DR   InterPro; IPR038969; FEN.
DR   InterPro; IPR008918; HhH2.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR   PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR   Pfam; PF01367; 5_3_exonuc; 1.
DR   Pfam; PF02739; 5_3_exonuc_N; 1.
DR   SMART; SM00475; 53EXOc; 1.
DR   SMART; SM00279; HhH2; 1.
DR   SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Exonuclease {ECO:0000313|EMBL:AMX02798.1};
KW   Hydrolase {ECO:0000313|EMBL:AMX02798.1};
KW   Nuclease {ECO:0000313|EMBL:AMX02798.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000076077}.
FT   DOMAIN          3..262
FT                   /note="5'-3' exonuclease"
FT                   /evidence="ECO:0000259|SMART:SM00475"
SQ   SEQUENCE   297 AA;  32423 MW;  A1CCDDCADA05844C CRC64;
     MTTYLVDASV YIFRYYFALP PNWTGRQGYP TEAVYGFTNF ALDLLGRGPR YMACAFDESL
     GSCFRNELYP DYKCSRAQPD EALAFQLAAC REMAEAMGIA CFASERYEAD DLLAALTRIS
     ADQRPVIVSR DKDLGQLLAR GAASLWDFAA DIHMGAAAVQ AKFGVRPEQI ADYLALVGDS
     SDDIPGVPGI GPKTAARLLM EFDDIEALLR HTERVARLPL RGAAGIAKRL LTYAEQIRLA
     KRLTCLEDGI ELSVGVDDLV PRKADIHFVQ ALADEFGIGG LKAKIGRTLA AVNGETL
//
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