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Database: UniProt
Entry: A0A147I1Q2_9SPHN
LinkDB: A0A147I1Q2_9SPHN
Original site: A0A147I1Q2_9SPHN 
ID   A0A147I1Q2_9SPHN        Unreviewed;       392 AA.
AC   A0A147I1Q2;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   SubName: Full=RNA methyltransferase {ECO:0000313|EMBL:KTT71546.1};
GN   ORFNames=NS334_10225 {ECO:0000313|EMBL:KTT71546.1};
OS   Sphingomonas endophytica.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingomonas.
OX   NCBI_TaxID=869719 {ECO:0000313|EMBL:KTT71546.1, ECO:0000313|Proteomes:UP000074310};
RN   [1] {ECO:0000313|EMBL:KTT71546.1, ECO:0000313|Proteomes:UP000074310}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NS334 {ECO:0000313|EMBL:KTT71546.1,
RC   ECO:0000313|Proteomes:UP000074310};
RX   PubMed=26793183;
RA   Midha S., Bansal K., Sharma S., Kumar N., Patil P.P., Chaudhry V.,
RA   Patil P.B.;
RT   "Genomic Resource of Rice Seed Associated Bacteria.";
RL   Front. Microbiol. 6:1551-1551(2016).
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RNA M5U methyltransferase family. {ECO:0000256|PROSITE-
CC       ProRule:PRU01024}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KTT71546.1}.
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DR   EMBL; LDTB01000038; KTT71546.1; -; Genomic_DNA.
DR   RefSeq; WP_058755863.1; NZ_LDTB01000038.1.
DR   AlphaFoldDB; A0A147I1Q2; -.
DR   OrthoDB; 9804590at2; -.
DR   Proteomes; UP000074310; Unassembled WGS sequence.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR   GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 2.40.50.1070; -; 1.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR030390; MeTrfase_TrmA_AS.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   InterPro; IPR010280; U5_MeTrfase_fam.
DR   PANTHER; PTHR11061; RNA M5U METHYLTRANSFERASE; 1.
DR   PANTHER; PTHR11061:SF30; TRNA (URACIL(54)-C(5))-METHYLTRANSFERASE; 1.
DR   Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR   PROSITE; PS01230; TRMA_1; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01024};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01024};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01024}.
FT   ACT_SITE        347
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU10015"
FT   ACT_SITE        347
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         230
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         257
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         275
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         321
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
SQ   SEQUENCE   392 AA;  41885 MW;  B46F4C401C8D7B27 CRC64;
     MTTITRIAAR GEGVAADGRH VALAAPGDTL ADDGTLIPGP HHIDPPCRHY PECGGCQLQH
     LDDESWAGFI TDRIASALDA HGLTTIIRAP ALSPPHTRRR ATLHVEPSGR IGFTAERSHQ
     IVDLHECHVI APELFALVRP LKRLLPSFKA KRRLDVHLTL ADQGVDVLVK GVAPEGLSHH
     DALTAFAQAH KVARIAFDDG MGPETRWEPE PVTITLGGVA VPLPPAAFLQ ATTEGEAALV
     AAVCESVGAA KITADLFAGL GTFALALPGR VYAAEGARDA IMALKAAAGR AQRLVFTEHR
     DLFRRPLTTA ELNRFDAIVI DPPRAGARDQ VTQLAAGTVP VIAYVSCNPS TFAADAQRLR
     EGGYALDWIQ PVGQFRWSTH VELAARFSRS PS
//
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