ID A0A147JCH2_9SPHN Unreviewed; 644 AA.
AC A0A147JCH2;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:KTW17621.1};
GN ORFNames=NS258_01820 {ECO:0000313|EMBL:KTW17621.1};
OS Sphingomonas sanguinis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=33051 {ECO:0000313|EMBL:KTW17621.1, ECO:0000313|Proteomes:UP000074410};
RN [1] {ECO:0000313|EMBL:KTW17621.1, ECO:0000313|Proteomes:UP000074410}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NS258 {ECO:0000313|EMBL:KTW17621.1,
RC ECO:0000313|Proteomes:UP000074410};
RX PubMed=26793183;
RA Midha S., Bansal K., Sharma S., Kumar N., Patil P.P., Chaudhry V.,
RA Patil P.B.;
RT "Genomic Resource of Rice Seed Associated Bacteria.";
RL Front. Microbiol. 6:1551-1551(2016).
CC -!- FUNCTION: Required for the biogenesis of c-type cytochromes. Possible
CC subunit of a heme lyase. {ECO:0000256|ARBA:ARBA00037230}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane
CC {ECO:0000256|ARBA:ARBA00004429}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004429}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
CC {ECO:0000256|ARBA:ARBA00009186}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KTW17621.1}.
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DR EMBL; LDTC01000009; KTW17621.1; -; Genomic_DNA.
DR RefSeq; WP_058715440.1; NZ_LDTC01000009.1.
DR AlphaFoldDB; A0A147JCH2; -.
DR PATRIC; fig|33051.5.peg.3656; -.
DR Proteomes; UP000074410; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0015232; F:heme transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0017004; P:cytochrome complex assembly; IEA:InterPro.
DR InterPro; IPR032523; CcmF_C.
DR InterPro; IPR002541; Cyt_c_assembly.
DR InterPro; IPR003567; Cyt_c_biogenesis.
DR InterPro; IPR003568; Cyt_c_biogenesis_CcmF.
DR NCBIfam; TIGR00353; nrfE; 1.
DR PANTHER; PTHR43653; CYTOCHROME C ASSEMBLY PROTEIN-RELATED; 1.
DR PANTHER; PTHR43653:SF1; CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF; 1.
DR Pfam; PF16327; CcmF_C; 1.
DR Pfam; PF01578; Cytochrom_C_asm; 1.
DR PRINTS; PR01410; CCBIOGENESIS.
DR PRINTS; PR01411; CCMFBIOGNSIS.
PE 3: Inferred from homology;
KW Cell inner membrane {ECO:0000256|ARBA:ARBA00022519};
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Cytochrome c-type biogenesis {ECO:0000256|ARBA:ARBA00022748};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 40..65
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 99..115
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 127..146
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 180..200
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 212..232
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 252..269
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 276..295
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 315..334
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 355..379
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 391..415
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 427..444
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 450..470
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 482..505
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 610..631
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 92..298
FT /note="Cytochrome c assembly protein"
FT /evidence="ECO:0000259|Pfam:PF01578"
FT DOMAIN 318..629
FT /note="Cytochrome c-type biogenesis protein CcmF C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF16327"
SQ SEQUENCE 644 AA; 68779 MW; 159C7ABB1145E05B CRC64;
MIAEAGLAAL WFAAMLAGLQ LLLGVLALRR KDVAGEQAIM AIGPVAIVQG ALVAIAMAAL
IAVFLNTDLS VKLVAENSHS AKPWIYKFAG AWGNHEGSML LWVTILGAGG ALVAWKERTL
DRATHVATLA AQGAIALGFY VFLLFASNPF ARLNPAPIEG QGLNPLLQDP GLAFHPPTLY
AGYVGLSVAF SFAVGALVTG QVGPAFARAM RPWVLGAWVL LTIGITAGSY WAYYELGWGG
WWFWDPVENA SLMPWLAATA LLHSVNVLAA RDGLRAWTVM LAVVAFSMSM IGTFLVRSGI
LTSVHAFAVD PRRGAFILAL LGIYIGGALA LFGARIGQVR AGRNFAFVSR EGGLVVNNLL
LSVILGIVLI GTLYPLVAAG FGVRLSVGPP FFHAAAGPIA LALVAVMAVG PMLSWRQDQA
EAVLIRMLWP MVAAAGTFAL LLTLTGGMGV LPLLGLSFGV GLIVASVLPI TRRNWRRTPL
PIWGMVVAHA GIGVSMIGMA CDSAFTAERL VALYPGQATI VGPWRVQLDR IYPNVGPNWS
ALAAKLTVAR DGTAETLRPQ QRFFTDPPTT TSESAIATHW DGQLYTVLGQ QDAATGRWQL
RLWWKPFVTL IWLGGALVAL GGALALFGRW FKGWQQRRRA RLWE
//