ID A0A151M394_ALLMI Unreviewed; 600 AA.
AC A0A151M394;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Protein SOGA3 isoform A {ECO:0000313|EMBL:KYO18982.1};
GN Name=SOGA3 {ECO:0000313|EMBL:KYO18982.1};
GN ORFNames=Y1Q_0018940 {ECO:0000313|EMBL:KYO18982.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO18982.1};
RN [1] {ECO:0000313|EMBL:KYO18982.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO18982.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO18982.1}.
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DR EMBL; AKHW03006769; KYO18982.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151M394; -.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0005615; C:extracellular space; IEA:InterPro.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0010506; P:regulation of autophagy; IEA:InterPro.
DR InterPro; IPR027881; SOGA.
DR PANTHER; PTHR15742:SF2; PROTEIN SOGA3; 1.
DR PANTHER; PTHR15742; UNCHARACTERIZED; 1.
DR Pfam; PF11365; SOGA; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 532..565
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 111..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 362..406
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1..38
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 210..344
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 366..406
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 600 AA; 70198 MW; 9F9F5D3779880298 CRC64;
MEKLREENET LKEMRHELER ANKNCRILQY RLRKAERKRL RYAQTGEIDG ELLRSMEQDL
KVAKDVSVRL HHELENVEEK RTITEDENEK LRQQLIEVEI AKQALQNELE KMKEQSLKRR
GSKDLQKSEK KSQQTPTEED NEDLKCQLQF VKEEAALMRK KMAKIDKEKD RFEHELQKYR
SFYGDLDSPL PKGEAGGPPT TREAELKLRL RLVEEEANIL GRKIVELEVE NRGLKAELDD
LRGDDFSGTA NPLMGEQSES LSELRQHLQL VEDETELLRR NLADLEEQNK RVTAELNKYK
YKSGAHESSR HHDNAKTEAL QEELKAARMQ INELSGKVMQ LQYENRVLMS NMQRYDLASH
LGIRGSPRDS DAESDAGKKE SDDDSRPPHR KREGPIGGES DSEEVRNIRC LTPTRSFYPT
PTGWQKNFTD RQQMKDIRSE AERLGKTIDR LISDTSTIIT EARIYVANGD LFGLMDEEDD
GSRIREHELL YRINAQMKAF RKELQTFIDR LEVPKSSDDR SSDEPLSMFQ PIILLILILV
LFSSLSYTTI FKLVFLFTLF FVLYYRLRFA ELELFIPASY AFHRFHCYIR NGLKNFQRTS
//
