ID A0A151MCX0_ALLMI Unreviewed; 227 AA.
AC A0A151MCX0;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 11.
DE SubName: Full=Claudin domain-containing protein 1 {ECO:0000313|EMBL:KYO22387.1};
GN Name=CLDND1 {ECO:0000313|EMBL:KYO22387.1};
GN ORFNames=Y1Q_0002974 {ECO:0000313|EMBL:KYO22387.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO22387.1};
RN [1] {ECO:0000313|EMBL:KYO22387.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO22387.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO22387.1}.
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DR EMBL; AKHW03006231; KYO22387.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151MCX0; -.
DR STRING; 8496.A0A151MCX0; -.
DR eggNOG; ENOG502QRAV; Eukaryota.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.140.150; -; 1.
DR InterPro; IPR042356; CLDN1.
DR InterPro; IPR004031; PMP22/EMP/MP20/Claudin.
DR PANTHER; PTHR14347; CLAUDIN DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR14347:SF3; CLAUDIN DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF13903; Claudin_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 114..141
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 147..167
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 227 AA; 25435 MW; 9362D8A58910761C CRC64;
MAASIGTDFW YEYHNPAENI SELGKIIVDE FISDDADEKT YTDALFRCNG TVGLWRRCIT
VPKNVHWYSP PENEMTTKCI SFSLSDQFME KYIEPGNHNS GTDLNRTYLW RLQFLLPFVS
LGLMCFGALI GLCACACRSL YPAIATGVLH FLAGLCTLGL VGCYVAGIEL LHQKLPLPDG
VKDCKDSRQS KISRGIHTNN GTMKDKMGRT PLRDTCSLYE TSEKPDR
//
