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Database: UniProt
Entry: A0A151MJB3_ALLMI
LinkDB: A0A151MJB3_ALLMI
Original site: A0A151MJB3_ALLMI 
ID   A0A151MJB3_ALLMI        Unreviewed;      5107 AA.
AC   A0A151MJB3;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   03-MAY-2023, entry version 20.
DE   SubName: Full=E3 ubiquitin-protein ligase UBR4 isoform A {ECO:0000313|EMBL:KYO24559.1};
GN   Name=UBR4 {ECO:0000313|EMBL:KYO24559.1};
GN   ORFNames=Y1Q_0023250 {ECO:0000313|EMBL:KYO24559.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO24559.1};
RN   [1] {ECO:0000313|EMBL:KYO24559.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO24559.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- SIMILARITY: Belongs to the UBR4 family.
CC       {ECO:0000256|ARBA:ARBA00009970}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO24559.1}.
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DR   EMBL; AKHW03006061; KYO24559.1; -; Genomic_DNA.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd19680; UBR-box_UBR4; 1.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR025704; E3_Ub_ligase_UBR4_C.
DR   InterPro; IPR045841; E3_UBR4_N.
DR   InterPro; IPR045189; UBR4-like.
DR   InterPro; IPR047509; UBR4-like_UBR-box.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR003126; Znf_UBR.
DR   PANTHER; PTHR21725; E3 UBIQUITIN-PROTEIN LIGASE UBR4; 1.
DR   PANTHER; PTHR21725:SF1; E3 UBIQUITIN-PROTEIN LIGASE UBR4; 1.
DR   Pfam; PF13764; E3_UbLigase_R4; 1.
DR   Pfam; PF19423; E3_UBR4_N; 2.
DR   Pfam; PF02207; zf-UBR; 1.
DR   SMART; SM00396; ZnF_UBR1; 1.
DR   SUPFAM; SSF48371; ARM repeat; 2.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS51157; ZF_UBR; 1.
PE   3: Inferred from homology;
KW   Calmodulin-binding {ECO:0000256|ARBA:ARBA00022860};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW   Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT   DOMAIN          1600..1673
FT                   /note="UBR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51157"
FT   ZN_FING         1600..1673
FT                   /note="UBR-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00508"
FT   REGION          540..582
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1677..1730
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2610..2636
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2654..2690
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2759..2893
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          3265..3310
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        540..555
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        564..582
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1715..1730
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2614..2636
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2759..2817
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2854..2876
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        3265..3289
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        3290..3309
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   5107 AA;  566474 MW;  39E72D98E435CD60 CRC64;
     MAASGGGAAE PGWEVAVRPL LSASYSAFEL KELPQLLASV IESESEILHH DKQYEPFYSS
     FVALSTHYIT TVCGLIPRNQ LQSVAAACKV LIEFSLLRLE NPDEACAVSQ KHLILLIKGL
     CTGCSRLDRT EIITFTAMMK SAKLPQTVKT LSDVEDQKEL ASPVSPELRQ KEVQMNFLNQ
     LTSVFNPRVT ASPSLAPETQ VEGESEDQAS TDQASAAKTK SIFIAQNVAS LQELGGSEKL
     LRVCLNLPYF LRYINRFQDA VSANSFFIMP ATVADATAVR NGFHSLVIDV TMALDTLSLP
     VLEPLTPTRL QDVTVLALSC LYAGVSVATC MAILHVGSTQ QVRTGSTSSK EEDYENDAAT
     IVQKCLEIYE MIGQAISNSR RAGGEHYQNF QLLGAWCLLN SLFLILNLSP TALADKGKEK
     DPLAALRVRD IIARTKEGVG SPKLGPGKGH QGFGVLSVVL ANHAIKLLTS LFQDLQVEAL
     HKGWETDGPP AVLNIMAQST SIQRIQRLID SVPLTNLLLT LLSTSYRKAC VLQRQRKGSM
     SSDASASTDS NTYYEDDFSS TEEDSSQVKS PNKQTTGENG NILASRKDPE LFLSLASNIL
     NFITTSMLNS RNNFIRNYLS VSLSEQHMAT LASIIKEVDK DGLKGTSDEE FAAALYHFNH
     SLVTSDLQSP TLQNTLLQQL GVAPFSEGPW PLYIHPQSLS VLSRLLLIWQ HKASAQGDPD
     VPECLKVWER FVSTLKQNAL QGALPNDTED LNVEHLQLLL LIFHNFSEKG RRSILTLCIQ
     TILDLTVKMD SQLQSVPLIL ARLLLVFDYL LHQYSKVPMY LFEQVQYNLL TPPIGWVSGS
     QESSRRTAIP IYHGFKEVEE NWTKHCSSDA VPQPRFYCIL SPEASEDDLN RLDNTVCEVL
     FSRIVKYDEL YAALTSLLAA GSQFDTLRRK ENKNVTALEA CALQYYFLIL WRILGILPPS
     KNYMNQLAMN TPDMSECDIL HTLRWSSRLR IISYVVWIKD HLIKQGMKAE HAASLIKLAS
     TKCSSVKYDV EIAEEYFARQ ISSFCGIDCT TILQLHEIPS LQAIYTLDAA ISKIQVSLDE
     HFSKLAAETD PHKSSEITKN LLPATLQLID TYATFTRSYL LRSLSEEGST ENKPSEEKLR
     GYAAVLAIGS SRCKSNTLGP TLVQNLPPAV QTLCESWNNI HTNEFPNIGS WRNAFANDTI
     PAESYISAVQ AAHLGTLCSQ SLPLAASLKH TLLSLVRLTG DLIVWSDELN PQQVIHTLLP
     LLLETSTESV AEISSNSLER VLGPAESDEF LARVYEKLIT GCYNILANHS DPNSGLDESI
     LEECLQHLEK QLESSQARKA MEEFFSESGE LVQIMMATAN ENLSAKFCNR VLKFFTKLFQ
     LTEKSPNPSL LRLCGSLAQL ACVEPVRLQA WLTRMTMSPP KDSDQLDVVQ ENRQLLQLLT
     TYIVRENSQV GEGVCTVLLS TLIPMATEML ANGDGTGFPE LMVVMATLAS AGQGAGHLQL
     HSAAVDWLSR CKKYLSQKNV IEKMNANVMQ GKHVTILECT CHIVSYLADV TNALSQTSGQ
     GPSHLSVDGE ERAIEVDSDW VEELAVEEED SQAEDSDEDS LCNKLCTFTI TQKEFMNQHW
     YHCHTCKMVD GVGVCTVCAK VCHKDHEISY AKYGSFFCDC GAKEDGSCLA LVKRTPSSGM
     SSTMKESAFQ SEPRVPESVI RHATTSPAEK SKVTISEGKG PDEEKPKKSS LCRNVEGCRE
     ELQSQANFSF APLVLEMLNF LMEAIQINFQ QASAMGSSSR AQQALNELHA VDKTVEMTDQ
     LMVPTLGSQE GAFENVRMNY SGDQGQTIRQ LISAHVLRRV AMCVLSSPHG RRQHLAVSHE
     KGKITVLQLS ALLKQADSSK RKLTLTRLAS APVPFTVLSL TGNPCKEDYL AVCGLKDCHV
     LTFSSSGSVS DHLVLHPQLA TGNFIIKAVW LPGSQTELAI VTADFVKIYD LSVDALSPTF
     YFLLPSSKIR DVTFLFNEEG KNIIVIMSSA GYIYTQLMEE ASSAQHGPFY VTNVLEVSHE
     DLKDSNGQVA GGGVSVYYSH VLQMLFFSYC QGKSFAATIS RATLEVQRLF PINIKSSNGG
     SKTSPALCQW SEVMNHPGLV CCVQQTTGVP LVVMVKPDTF LIQEIKTLPA KAKIQDMVAI
     RHTACNEQQR TTMILLCEDG SLRIYMANVE NTSYWLQPSL QPSSVISIMK PVRKRKAAAI
     TTRTSSQVNF PIDFFEHNQQ LTDVEFGGND LLQVYNAQQI KHRLNSTGMY VANTKPGGFT
     IEVTNNNSTM VMTGMRIQIG TQAIERAPSY LEIFGRTMQL NMTRARWFDF PFTREEALQA
     DKKLTIFIGA SVDPAGVTMM DSIKIYGKTK EQFGWPDEPP EDFPSASVSN VCPPNLNQGN
     GTGDTEAATP ATASGTVLER LVVSSLEALE SCFAVGPVNE KEKNKAAAQE LATMLLSMPA
     PSSVQQQTKS LLASLHTSRS AYHNHKDQAL LSKAIQYLSS SSKEGKDLDP EVFQRLVITA
     RSIAIMRPNN LVHFTESKLP QLEAEAGLTH VEATVNALVD IIHGYCTCEL DCINTASKIY
     MQMLLCPDPA VSFSCKQALI RVLRPRNKRR HVTLPSSPRS NTPMEQEWNL DSSPGSPTRR
     NGYVCEWYLC GPGDKDDDDD DDAEDKMQTS GIANGEHIRQ ESQEQSEVDH GDFEMVSESM
     VLETSENVNN GNPSPLEALL AGAEGFPPML DIPPDADDET MVELAIALSL QQDQQGSSSS
     ALGLQSLGLS GQAPSSSSLD AGTLSDTTAS APASDDEGST AATDGSTLRT SPADHGGSVG
     SESGGSAVDS VAGEHSVSGR SSAYGDTTAE GHPAGPGSVS SSTGAISTTT GQQEGDGSEG
     EGEGEAEGDV HTSNRLHMVR LMLLERLLQN LPQLRNVGGV RAIPYMQVIL MLTTDLDGDD
     EKDKGALDNL LSQLIAELCM DKKDVSKKNE RSPVNEVHLV VMRLLSVFMS RTKSGSKSSI
     CESSSLISSA TAAALLSSGA VDYCLHVLKS LLEYWKSQQN DEEPVATSQL LKPHTTSSPP
     DMSPFFLRQY VKGHAADVFE AYTQLLTEMV LRLPYQIKKI ADTNSRIPPP IFDHSWFYFL
     SEYLMIQQTP FVRRQVRKLL LFICGSKEKY RQLRDLHTLD SHVRGIKKLL EEQGIYLRAS
     VVTASSGSAL QYDTLISLME HLKACAEIAT QRTVNWQKFC IKDDSVLYFL LQVSFLVDEG
     VSPVLLQLLS CALCGSKVLS VASSSGSSTS STSAPAASGS GQPATQSKSS TKKSKKEEKE
     KEREGESSGS QEDQLCTALV NQLNKFADKE TLIQFLRCFL LESNSSSVRW QAHCLALHIY
     RNSNKSQQEL LLDLMWSIWP ELPAYGRKAA QFVDLLGYFS LKTQQTEKKL KEYSQKAVEI
     LRTQNHILTN HPNSNIYNTL SGLVEFDGYY LESDPCLVCN NPEVPFCYIK LSSIKVDTRY
     TTTQQVVKLI GSHTISKVTV KIGDLKRTKM VRTINLYYNN RTVQAIVELK NKPARWHKAK
     KVQLTPGQTE VKIDLPLPIV ASNLMIEFAD FYENYQASTE TLQCPRCSAS VPANPGVCGN
     CGENVYQCHK CRSINYDEKD PFLCNACGFC KYARFDFMLY AKPCCAVDPI ENEEDRKKAV
     TNINTLLDKA DRVYHQLMGH RPQLENLLCK VNEAAPEKPQ DESGSSGGIS STSASVNRYI
     LQLAQEYCGD CKNSFEELSK IIQKVFASRK ELLEYDLQQR EAATKSSRTT VQPTFTASQY
     RALSVLGCGH TSSTKCYGCA SAVTEHCITL LRALATNSAI RHILVSQGLI RELFDYNLRR
     GAATMREEVR QLMCLLTRDN PEATQQMNDL IIGKVSAALK GHWANPDLAS SLQYEMLLLT
     DSISKEDSCW ELRLRCALSL FLMAVNIKTP VVVENITLMC LRILQKLIKP PAPTSKKNKD
     VPVDTLTTVK PYSNEIHAQA QLWLKRDPKA SYEAWKKCLP ARGIEANGKS PSRTELHQLY
     LSEKYIWKWK QFMSRRGKRT CPLDLKLGHN NWLRQVLFTP ATQAARQAAC TIVEALATIP
     SRKQQVLDLL TSYLDELSIA GECAAEYLGL YQKLIKPAHW KVYLAARGVL PYIGNLITKE
     IARLLALEEA TLSTDLQQGY ALKSLTGLLS SFVEVESIKR HFKSRLVGTV LNGYLCLRKL
     VVQRTKLIDE TQDMLLEMLE DMTTGTESET KAFMAVCIET AKRYSLDDYR TPVFIFERLC
     SIIYPEENEV TEFFVTLEKD PQQEDFLQGR MPGNPYSSNE PGIGPLMRDI KNKICQDCDL
     VALLEDDSGM ELLVNNKIIS LDLPVAEVYK KVWCPTNEGE PMRIIYRMRG LLGDATEEFI
     ESLDSTTDEE EDEEEVYKMA GVMAQCGGLD CMLNRLTGIK DFKQGRHLLT VLLKLFSYCV
     KVKVNRQQLV KPEMNTLNVM LGTLNLALVA EQESKDSGGA AVAEQVLSIM EIILDESNAE
     PLSEDKGNLL LTGDKDQLVM LLDQINSTFV RSNLSVLQGL LRIIPYLSFG EMEKMQILVD
     RFKPYCNFDK YDEEHSGDDK VFLDCFCKIA AGIKNNSNGH QLKDLILQKG ITQNALDYMK
     KHIPSAKNLD ADIWKKFLSR PALPFILRLL RGLATQHPAT QVLIGTDSIT NLHKLEQVSS
     DEGIGTLAEN LLEALREHPE VNKKIDAARK ETRAEKKRMA MAMRQKALGT LGMTTNEKGQ
     VVTKTALLKQ MEELIEEPGL TCCICREGYK FQPAKVLGIY TFTKRVALEE FENKPRKQQG
     YSTVSHFNIV HYDCHLAAVR LARGREEWES AALQNANTKC NGLLPVWGPH VPESAFATCL
     ARHNTYLQEC TGQREPTYQL NVHDIKLLFL RFAMEQSFSV DTGGGGRESN IHLIPYIIHT
     VLYVLNTTRA TSREEKNLQS FMEHPKEKWV ESAYEVDGPH YYTVLALHIL PPEKWKAMRV
     EILKRLLVTS HARAVSPGGA SRLTDKTVKE YSTYRSGLLF WALVDLIYNM FKKVPTSNTE
     GGWSYSLAEF IRHNDMPIHE AADKALKTFQ EEFMPVETFS EFLDVAGLLT EISDPDSFLK
     DLLNSIP
//
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