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Database: UniProt
Entry: A0A151NKU6_ALLMI
LinkDB: A0A151NKU6_ALLMI
Original site: A0A151NKU6_ALLMI 
ID   A0A151NKU6_ALLMI        Unreviewed;      1330 AA.
AC   A0A151NKU6;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=LIM domain only protein 7 isoform D {ECO:0000313|EMBL:KYO37426.1};
GN   Name=LMO7 {ECO:0000313|EMBL:KYO37426.1};
GN   ORFNames=Y1Q_0017237 {ECO:0000313|EMBL:KYO37426.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO37426.1};
RN   [1] {ECO:0000313|EMBL:KYO37426.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO37426.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO37426.1}.
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DR   EMBL; AKHW03002722; KYO37426.1; -; Genomic_DNA.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0003779; F:actin binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0031032; P:actomyosin structure organization; IEA:InterPro.
DR   GO; GO:0030155; P:regulation of cell adhesion; IEA:InterPro.
DR   GO; GO:0023051; P:regulation of signaling; IEA:InterPro.
DR   CDD; cd08368; LIM; 1.
DR   CDD; cd00136; PDZ; 1.
DR   Gene3D; 2.30.42.10; -; 1.
DR   Gene3D; 1.10.418.10; Calponin-like domain; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR   InterPro; IPR001997; Calponin/LIMCH1.
DR   InterPro; IPR001715; CH_dom.
DR   InterPro; IPR036872; CH_dom_sf.
DR   InterPro; IPR031865; DUF4757.
DR   InterPro; IPR029978; LMO-7.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR003096; SM22_calponin.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR46767; LIM DOMAIN ONLY PROTEIN 7; 1.
DR   PANTHER; PTHR46767:SF1; LIM DOMAIN ONLY PROTEIN 7; 1.
DR   Pfam; PF00307; CH; 1.
DR   Pfam; PF15949; DUF4757; 1.
DR   Pfam; PF00412; LIM; 1.
DR   Pfam; PF00595; PDZ; 1.
DR   PRINTS; PR00889; CALPONIN.
DR   PRINTS; PR00888; SM22CALPONIN.
DR   SMART; SM00033; CH; 1.
DR   SMART; SM00132; LIM; 1.
DR   SMART; SM00228; PDZ; 1.
DR   SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR   SUPFAM; SSF50156; PDZ domain-like; 1.
DR   PROSITE; PS50021; CH; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR   PROSITE; PS50106; PDZ; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW   ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT   DOMAIN          12..129
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   DOMAIN          642..723
FT                   /note="PDZ"
FT                   /evidence="ECO:0000259|PROSITE:PS50106"
FT   DOMAIN          1259..1325
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   REGION          215..236
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          257..313
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          350..406
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          473..638
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          901..946
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1005..1033
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1078..1115
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1177..1253
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          827..877
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        289..313
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        473..498
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        538..560
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        563..577
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        587..601
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        923..946
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1005..1019
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1078..1092
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1099..1115
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1330 AA;  150152 MW;  1198BDABD0E01B30 CRC64;
     MESGEEPAGG CEAAFAEAQR WVEAVTGKSF GTKSFRAALE NGVLLCDLIN KIKPGIIKKI
     NRLSTPIAGL DNINVFLKAC ENIGLKEAQL FHPGDLQDLS NRVTVKPEET NRRVKNVLIT
     LYWLGRKAQS NPHYNGPYLN LKAFEKLLGQ ALTKALEESS SLKRSGRDSG YGDIWSIDRG
     EAFSSISHKR DDSFDSLDSF GSRSSASFSS DITLKGGSEG CGSDTDSELP YKMHNSHKDD
     MSYRRLSAVE PKPLTDFNRF LPSKSKPSAY MPAPLRKKRI EKNEDNRRSW ASPVSTESDG
     TLSRSKSLTD ISADELQSMR KIRFEELQKI KAQLQEQDQR WQDDLAKWKS RRKSFTSDLQ
     KKKEEREDIE RKTSEVSVRN TKSLKEMQRD REKRDHETYG DNQRTTERKW IYSSYDDVFS
     EEKTSSRSSV AKDYLVEKDT TDVFKNNEKP LAAPTSKENL QKWESYATVN AQTGSARVSA
     SLPRSYQKTD TSRLTSVVTP RPFGVHTRGI SSLPRSFTMD DAQKYNGEVD RAKRAPALFT
     SNSFSQPETR QPLSTTALKS GNEDAEDEEE EEEEEKEEDI KRTYSPISVA SAVSQDQDAG
     SHGLKSEYYT SPDSVTVAPS AERRSLPEPE VSRSRDQYSE MRISINQKPG KSHNFGFTAN
     WNTSGVFVQS IEKGSPADLC QLHVDDEIIT VSGTKVSHMD PAEGEEAIAN ALETGNLVMD
     VRRYGKNGTS ENKWIDATSG DHFPTTSSDI STKTDFNSSL QNSDTGAKVI NGMQADLCSN
     EQKESESISL KNLKRRSQFF EQGGSESAIS DLSVPSITVP SRRVWDQEEE RKRQEKWQKE
     QERLLQEKYK REQEKLREEW LRAQEEAEKE SSKYQDEEQC VLTADTMSIT AHVPLASSWR
     TVMGGDADVP EGGGGSEQGS QQQQNEKEKD EERRWLQEEQ GLEEKEILHL KQKSELQELE
     LEQRRKEIEQ QYTEDQKRWA EAEEQHQRFY KHYDEPKTIE DRSGHFLADR SKSRSTSELD
     DYTTNRNGQY EKPLGGIARG LLQDELNQKQ SVKMQQETKE PEQKAPRRQM LYHMKYNNPK
     QAGTNNKYLE KSRNVPDSQK GSQKEPAMSQ AEAERQQILQ EMRKRTSLHT DNSWIRQRSS
     SVYKEPITVH NTLMRRGESL DNLDSSRTSS WRHHSWMNQS VSSSQDYTRP APPAGSTSNR
     AYTCTPSSNV APSSTSSVRT ASSTHTLPSA PSPVPCAQSP TSASQSGSQT RNKSISGKKI
     CSYCNNVLGK GAAMIIESLG LCYHLHCFKC VACKCNLGGS GSGAEVRIRN NELFCNDCYI
     RFKTGQPTSM
//
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